Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 87.8 1e-12
>seq1071
Length=16463
Score = 87.8 bits (96), Expect = 1e-12
Identities = 158/229 (69%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| ||||| || || |||||||| ||||| || || |||| || ||| ||
Sbjct 1520 ATGCAGATTTTCGTCAAGACTCTTACGGGGAAGACGATCACGCTTGAGGTGGAATCATCC 1461
Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
|| | || |||| || || || || || || || ||| | || ||| |
Sbjct 1460 GATACCATTGACAAC--GTGAAGTCGAAGATCCAGGATAAGGAGGGTATCCCACCGGACC 1403
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967
|||| || | || ||||| || || || |||| || | |||| ||||||||||||||
Sbjct 1402 AGCAGCGCCTGATCTTTGCTGGTAAGCAGCTGGAGGATGGCCGCACCTTGTCCGATTACA 1343
Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016
|||| || || ||| ||| |||| |||||| ||||| ||||||| ||
Sbjct 1342 ACATTCAGAAGGAGTCTACTCTGCACTTGGTTCTGCGTCTGCGTGGTGG 1294
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355847918513253
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |