Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq1537 152 1e-31
seq1071 143 6e-29
seq3072 125 2e-23
seq1847 120 7e-22
>seq1537
Length=49637
Score = 152 bits (168), Expect = 1e-31
Identities = 167/222 (75%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||||||||||| ||| | ||| |||||||| || || |||| ||||| || | | ||
Sbjct 26394 ACGAAGTCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 26453
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| || |||||||| || || || ||||| || ||||| ||
Sbjct 26454 GCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCC 26513
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
|||||||| |||||||| ||| ||| ||||| ||||| || | ||||| || |
Sbjct 26514 CTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAG 26573
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| ||||||||||||| || || | ||| | ||||||
Sbjct 26574 GGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 26615
>seq1071
Length=16463
Score = 143 bits (158), Expect = 6e-29
Identities = 165/222 (74%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
||| || | ||| || | ||| ||||| || || || || | |||||||||| ||| ||
Sbjct 1299 ACGCAGACGCAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGT 1358
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
| ||||| || |||||||| ||||| ||||| || || || ||||| || || |||||
Sbjct 1359 GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACC 1418
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || |||||||| |||||| || ||||| || || | |||||| || |
Sbjct 1419 CTCCTTATCCTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATGATTCCACCTCAAG 1478
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
|||||||||||| ||||| | ||| || | ||| | |||||
Sbjct 1479 CGTGATCGTCTTCCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520
Score = 123 bits (136), Expect = 6e-23
Identities = 140/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
||||| | |||||| ||||| || || |||| ||||| |||| | || | || ||
Sbjct 1765 AGGACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 1824
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| || ||||| || |||||||| || ||||| ||||| || ||||| || |||||||||
Sbjct 1825 TCAAGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 1884
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| ||| ||| ||||| || || |||| || || || | ||||| |||
Sbjct 1885 TGGATCTTGCTCTTAACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTC 1944
Query 225682 TTGCCCGT 225689
||||| ||
Sbjct 1945 TTGCCAGT 1952
Score = 122 bits (134), Expect = 2e-22
Identities = 151/207 (73%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551
|||||| | || || | ||| |||||| || || |||| ||||| ||| || ||
Sbjct 843 ACGAAGACGGAGCACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGT 902
Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611
|||||||| || ||||||||||| |||||||| || || || ||||| || || |||||
Sbjct 903 CCTCCCATCCTCGAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACC 962
Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671
||||| || || |||||| ||| || || ||||||||||| | || || || |
Sbjct 963 CTCCTTATCCTGAATCTTTGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAG 1022
Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTT 225698
|| || ||||| || ||||| || ||
Sbjct 1023 AGTAATGGTCTTTCCAGTCAAGGTCTT 1049
>seq3072
Length=1730
Score = 125 bits (138), Expect = 2e-23
Identities = 197/277 (71%), Gaps = 5/277 (2%)
Strand=Plus/Plus
Query 7444 TTATATTTAATATTTGGTGGCTTTTCTGGTATTAT-AGGTACTATATTTTCTATGATTAT 7502
|||||||||||||||| | ||||| || ||||| |||||| ||||| | | ||
Sbjct 1 TTATATTTAATATTTGCTTTATTTTCAGG-ATTATTAGGTACAGCTTTTTCAGTTTTAAT 59
Query 7503 AAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTACAA 7562
|| ||||||||| || || ||| |||| ||| || | | | ||| | || ||
Sbjct 60 CAGATTAGAATTAAGTGGACCTGGTGTTCAA-TATATAGCAG--ACAATCAATTATATAA 116
Query 7563 CGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGAT 7622
| ||| || || || || || | | |||||||||||| | |||||||| | ||||||
Sbjct 117 CAGTATAATAACAGCACACGCTATATTAATGATTTTCTTTATGGTTATGCCTGCTATGAT 176
Query 7623 AGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCC 7682
||| || || || |||| || | ||| | | | || | |||||||||||| |||||
Sbjct 177 AGGAGGATTTGGTAATTTTTTACTACCTCTTTTAGTAGGGGGTCCTGATATGGCATTTCC 236
Query 7683 AAGGCTTAACAATATAAGTTTTTGATTACTACCGCCT 7719
|| | || ||||||||||| |||||| |||| |||
Sbjct 237 TAGATTAAATAATATAAGTTTCTGATTATTACCACCT 273
Score = 86.0 bits (94), Expect = 1e-11
Identities = 80/102 (78%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731
|||||||||||| || |||||||| | |||||| || | ||||| || || || || |
Sbjct 678 TTCAGGATGACCGAAGAATCAGAAAAGATGTTGGTATAATATAGGGTCACCACCACCAGC 619
Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773
| ||||| || ||||||||||||||||||||||||||
Sbjct 618 AGCTTCAAAGAATGATGTATTAAAATTTCTATCAGTTAAAAC 577
>seq1847
Length=30800
Score = 120 bits (132), Expect = 7e-22
Identities = 134/179 (75%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585
|| |||| ||||| |||| | ||| | ||||| || |||||||| ||||| |||||
Sbjct 17775 TTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGATC 17716
Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645
|| || || ||||| || ||||| || |||||||| |||||||| ||| ||| |||
Sbjct 17715 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCG 17656
Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAA 225704
|| || || |||| || || || | ||||| |||||||||||||| || || | |||
Sbjct 17655 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 17597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192480182397266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |