Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1479 185 1e-41 seq2510 86.0 9e-12 >seq1479 Length=10203 Score = 185 bits (204), Expect = 1e-41 Identities = 416/624 (67%), Gaps = 2/624 (0%) Strand=Plus/Minus Query 77913 GTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGG 77972 ||| | |||| || || ||||| || |||| || |||||||||||||||| || ||| Sbjct 7116 GTAGAGAGCC--TCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGG 7059 Query 77973 CACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCAT 78032 ||||| | | ||||||||| | | || ||| || ||||| |||||||| || ||||| Sbjct 7058 CACATGAGAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAG 6999 Query 78033 AGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCG 78092 ||||| || | || |||| | ||| || || || ||||| | | || Sbjct 6998 AGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCC 6939 Query 78093 AGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGT 78152 | ||||| | | ||||| |||||||| || | ||| || || | | ||||| || Sbjct 6938 AAGAACTCGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCGC 6879 Query 78153 TTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATA 78212 || || || ||||| || | |||||||| ||||| || | || | | ||| |||| Sbjct 6878 TTGTTGCCACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACG 6819 Query 78213 ATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTA 78272 |||||||| || |||| || || || | ||| || || | || || ||| | Sbjct 6818 ATACCGTTCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGG 6759 Query 78273 ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCG 78332 ||| | || || ||||| || |||| || || | || || || | ||| || Sbjct 6758 ATGTTCAATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCA 6699 Query 78333 TAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGA 78392 ||||||||||| ||||| || ||| |||||| | | || ||| |||| || Sbjct 6698 TAGATACCCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCC 6639 Query 78393 TGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGT 78452 || || || ||||| || | ||| || || || || || || |||| ||| | Sbjct 6638 TGTGGTGTACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATG 6579 Query 78453 AGATTGTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGC 78512 || |||||||| ||||| || || || ||| ||||| || ||||| |||||| Sbjct 6578 AGGTTGTATGTCTCAATGGCCTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGC 6519 Query 78513 ATCAACATATGCTGAGGTCTTTCA 78536 || | ||| ||||| || |||||| Sbjct 6518 ATAATCATGTGCTGTGGCCTTTCA 6495 >seq2510 Length=23295 Score = 86.0 bits (94), Expect = 9e-12 Identities = 141/203 (69%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| || | ||| || ||||| || |||||||| || || | ||| Sbjct 9643 TCGTTGGAGAAAGTGAGGCCAGCCATGAGACCACGCTTCTTGAGCCAGAAAATAGAGGCG 9584 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 || || || || ||||| || || || ||||| || || || || | || | | Sbjct 9583 AACGAGCCGGAGAAGAAGATACCCTCAACGGCAGCGAAGGCAACCAGGCGCTGGGCAAAG 9524 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 ||| || |||| | ||||||| ||||| || ||||||||||| | ||||| Sbjct 9523 GTGGAATCCTTGTCTTGGATCCACCTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGG 9464 Query 48360 ATTGTTTCTATAGCATTAAAGAG 48382 || || || || ||||| ||||| Sbjct 9463 ATGGTCTCGATGGCATTGAAGAG 9441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694639806260960