Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1479 181 2e-40 >seq1479 Length=10203 Score = 181 bits (200), Expect = 2e-40 Identities = 560/858 (65%), Gaps = 14/858 (2%) Strand=Plus/Minus Query 76280 GATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCAT 76339 ||||| | ||||| ||||| ||||||| | | | || | | ||||||||||| Sbjct 7346 GATGCCAAGTTACACACGGCAACCTCATCTGGAGCAGAGTACTCGACAATCTCCGTGCAC 7287 Query 76340 AGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCC 76399 || ||| | ||| || || || || | ||||||||||| ||| || | ||| Sbjct 7286 AGGTTAGAGCTGCGGATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCC 7227 Query 76400 TTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACG 76459 || || | | || || |||| || ||| |||| || |||| ||| || | ||| | | Sbjct 7226 TTGTACAACATGAAAGGGTTTCCTGTCTCAGTCTGAGACTCGAGAATGGAGTACCAAA-G 7168 Query 76460 ACTCTAGCTTTTATTATAGATTTGTATCGCTTCT-CTCTT--TCATATTGT--GTATATA 76514 ||| | || || | ||| | ||||| ||| || |||| ||| | | Sbjct 7167 CTTCTGGGCCTTG--ATGGTCTTGCGACCCTTCTTCTCCGACTCGTATTTCTCGTAGAGA 7110 Query 76515 ACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCA 76574 || || || ||||| || |||| || |||| ||||| ||||| || || ||||| | Sbjct 7109 GCC--TCGAACTCATCACCGTAAACGTCCGCCAATCCAGGGCATTCGTTGGGGCACATGA 7052 Query 76575 ATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAA 76634 | ||| ||||| | | || ||| || ||||| |||||||| || ||||| ||||| Sbjct 7051 GAGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGT 6992 Query 76635 TAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACT 76694 || | || |||| | ||| || || || ||||| | | || | ||||| Sbjct 6991 AGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTCCTCAAGTCCAAGAACT 6932 Query 76695 CCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTAC 76754 | | | ||||| |||||||| || | ||| || || | |||| || || || || | Sbjct 6931 CGAAGACATCAGCGTGCCATGGCTCAACATAGATGGCGAAGGCACCAGGGCGCTTGTTGC 6872 Query 76755 CTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGT 76814 | ||||| || | |||||||||||||| || | || | | ||| |||| || |||| Sbjct 6871 CACCCTGGTCAACGTATCTGGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCGT 6812 Query 76815 TAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATA 76874 | || | || || || || | ||| || || ||||| ||| | || | Sbjct 6811 TCGAGTTTCCGTTGGTACCGGCAATGTATGCACCGGTGGCACGGATACGATGGATGTTCA 6752 Query 76875 GGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGC 76934 || || ||||| || | || ||||| | ||||| || | |||||||||||| | Sbjct 6751 ATCCGATACCTCCGGCAGTCTTTGAGATCATGGCACATGTCTTGAGTGTGTCATAGATAC 6692 Query 76935 CCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAG 76994 |||| |||||||| ||| |||||| | | || ||| |||| || || | Sbjct 6691 CCTCAATACTATCCTCCTTCATGTCGACCAAGAAGCAGGATGACAGCTGGGCCTGTGGTG 6632 Query 76995 TTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGT 77054 | || ||||| || | ||| || || || || ||||| |||| ||| | || |||| Sbjct 6631 TACCAGCATTGAAGAGTGTTGGGGAGGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGT 6572 Query 77055 ATGTTTCAATAACTGCTTCT--ATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 |||| ||||| | ||||| |||||| ||||| || || || |||||||| | Sbjct 6571 ATGTCTCAATGGC--CTTCTCAATATCCTCGCCGTGAATGCCAACCGCCACACGCATAAT 6514 Query 77113 CATATGCTGAGGTCGTTC 77130 ||| ||||| || | ||| Sbjct 6513 CATGTGCTGTGGCCTTTC 6496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712904643900480