Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1071 129 1e-24
seq1537 127 5e-24
>seq1071
Length=16463
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945
||| | ||| |||||||| | || ||||| || |||||||||||||| | ||||| |
Sbjct 1074 GAGGCGGAGAACAAGATGTAATGTGGACTCCTTCTGGATGTTGTAATCAGACAAAGTACG 1133
Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005
||||| || || || || ||||| || || | ||||||||||| | ||| || ||
Sbjct 1134 GCCATCCTCGAGCTGCTTGCCCGCGAAAATCAGGCGCTGCTGGTCCGGTGGGATGCCCTC 1193
Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065
||| |||||||| || ||||| | || | | | || || ||| ||||| || ||
Sbjct 1194 CTTATCTTGAATCTTGGACTTGACGTTATCGATGGTATCCGACGACTCGACTTCCAGCGT 1253
Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||| || || || ||||||||||| ||||||| |||||
Sbjct 1254 AATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 1292
Score = 120 bits (132), Expect = 7e-22
Identities = 152/208 (73%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||| ||| || ||||||||||| ||| | || |||||||| || |
Sbjct 858 CAAG-TGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTCGA 916
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| |||||||||||||| || | ||||||||||| | ||| || ||||| || ||||
Sbjct 917 GCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAA 976
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| ||| || || | || | | |||||||| ||| || || |||||||| || || |
Sbjct 977 TCTTTGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCTTTC 1036
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
| || | ||||| || || | ||||||
Sbjct 1037 CAGTCAAGGTCTTGACAAAAATCTGCAT 1064
Score = 102 bits (112), Expect = 2e-16
Identities = 148/208 (71%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| || ||||||||||| || || ||||||||||||| || || | ||||| || |
Sbjct 1314 CAAG-TGCAGAGTAGACTCCTTCTGAATGTTGTAATCGGACAAGGTGCGGCCATCCTCCA 1372
Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016
| || || || ||||| || | ||||||||||| | ||| || ||||| || || |
Sbjct 1373 GCTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGGA 1432
Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076
| || || || | || | | | || || || || ||||| || || || || |
Sbjct 1433 TCTTCGACTTCACGTTGTCAATGGTATCGGATGATTCCACCTCAAGCGTGATCGTCTTCC 1492
Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104
|||| |||||||| ||||| | ||||||
Sbjct 1493 CCGTAAGAGTCTTGACGAAAATCTGCAT 1520
>seq1537
Length=49637
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||| | ||| | |||||||| ||||| || ||||||||||| || | | || |
Sbjct 26398 AGTCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 26457
Query 151947 CCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCC 152006
||||| || || || ||||||||||| || | ||||||||||| | ||||| |||
Sbjct 26458 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCC 26517
Query 152007 TTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTA 152066
|| || || || || |||||| | || | |||| || ||| || ||||| ||
Sbjct 26518 TTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGACGACTCCACCTCAAGGGTG 26577
Query 152067 ATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| |||||||| || ||||||||||||| |||||
Sbjct 26578 ATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 26615
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153771438464469
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |