Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3557_20[genbank_20GCA_5F000750665.1_202014-09-09] 3,339 sequences; 27,649,855 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1537 152 4e-32
seq1071 147 2e-30
seq1847 105 5e-18
>seq1537
Length=49637
Score = 152 bits (168), Expect = 4e-32
Identities = 168/222 (76%), Gaps = 4/222 (2%)
Strand=Plus/Plus
Query 44120 AGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGC 44179
|||||||| |||| |||||| ||| |||||| ||||||||||| || | || |||
Sbjct 26398 AGTCTCAAGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGG 26457
Query 44180 TCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCC 44239
| || || |||||||| ||||| ||||||| |||||||| || | || | || |||
Sbjct 26458 CCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATTCCCTCC 26517
Query 44240 TTTTCCGTTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCG 44297
|| ||| ||||| ||| || ||| | || ||||||| || |||||||| | |
Sbjct 26518 TTGTCCTGGATCTTGGACTTGACATTGT--CGATAGTGTCGGACGACTCCACCTCAAGGG 26575
Query 44298 TAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGA 44339
| || ||||| ||||| |||||||||||||||||||||||||
Sbjct 26576 TGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGA 26617
>seq1071
Length=16463
Score = 147 bits (162), Expect = 2e-30
Identities = 175/235 (74%), Gaps = 2/235 (1%)
Strand=Plus/Plus
Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163
|| ||| || || | ||| | || |||| ||| || || |||||| || ||||||||
Sbjct 1287 TTGCATACCACCACGCAGACGCAGAACCAAGTGCAGAGTAGACTCCTTCTGAATGTTGTA 1346
Query 44164 ATCGG-CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGAT 44222
||||| | || | ||| | || ||||||||||| || |||||||||| |||||||| |
Sbjct 1347 ATCGGACAAGGT-GCGGCCATCCTCCAGCTGCTTACCAGCAAAGATCAGGCGCTGCTGGT 1405
Query 44223 CTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGG 44282
| | || | ||| ||||| ||| |||||| ||||| | | ||||| |||| |
Sbjct 1406 CCGGTGGGATACCCTCCTTATCCTGGATCTTCGACTTCACGTTGTCAATGGTATCGGATG 1465
Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||||||||| | ||| |||||||| ||||| || ||||| ||||| || |||||
Sbjct 1466 ATTCCACCTCAAGCGTGATCGTCTTCCCCGTAAGAGTCTTGACGAAAATCTGCAT 1520
Score = 131 bits (144), Expect = 1e-25
Identities = 157/211 (74%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| |||||| ||||||||||| ||||||||||| ||| || | | | || ||
Sbjct 855 CACCAAGTGAAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTCCCATCCTC 914
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||||||||| ||||||| |||||||| || | || | ||| ||||| |||
Sbjct 915 GAGCTGCTTCCCGGCGAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTG 974
Query 44248 TATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| || | || ||| | |||||||| | || || ||||| | ||||| ||||
Sbjct 975 AATCTT-TGACTTAACGTTGTCAATGGTGTCTGAAGACTCAACCTCGAGAGTAATGGTCT 1033
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|||| || | |||||| || || || |||||
Sbjct 1034 TTCCAGTCAAGGTCTTGACAAAAATCTGCAT 1064
Score = 98.7 bits (108), Expect = 7e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| |||||||||||||| | | || | || || |||||||| || || ||
Sbjct 1101 CTCCTTCTGGATGTTGTAATCAGACAAAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAA 1160
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265
|||| |||||||| || | || | || ||||| || ||||| ||| | |
Sbjct 1161 AATCAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGAATCTTGGACTTGACGTT 1220
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| ||||| || | || || || |||| |||||| |||||||| ||||| ||||| ||
Sbjct 1221 ATCGATGGTATCCGACGACTCGACTTCCAGCGTAATTGTCTTTCCGGTGAGAGTCTTGAC 1280
Query 44326 GAAGATTTGCAT 44337
||||||||||||
Sbjct 1281 GAAGATTTGCAT 1292
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/189 (71%), Gaps = 4/189 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|||| ||| || ||| |||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 1768 ACCAAGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCA 1827
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|| ||||| ||||| ||||||| ||| ||||| || | || | || ||||| ||
Sbjct 1828 AGTTGCTTTCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGG 1887
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| || ||| | || || |||| ||| || ||||| | || || ||||
Sbjct 1888 ATCTTGCTCTTAACATTGT--CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCT 1945
Query 44307 TTCCCGTGA 44315
| || ||||
Sbjct 1946 TGCCAGTGA 1954
>seq1847
Length=30800
Score = 105 bits (116), Expect = 5e-18
Identities = 135/184 (73%), Gaps = 4/184 (2%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| |||| || ||| | || || |||||||| || |||||||
Sbjct 17777 CCTTCTGGATGTTGTAGTCGGAAAGAGTGCGTCCATCCTCAAGCTGCTTGCCAGCAAAGA 17718
Query 44208 TCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAATGT 44265
||| |||||||| || | ||| | || ||||| ||| |||||| ||| || |||
Sbjct 17717 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCCTGGATCTTCGACTTGACATTGT 17658
Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325
| || || |||| ||| || ||||| | || || ||||| ||||| | |||||| ||
Sbjct 17657 --CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGAC 17600
Query 44326 GAAG 44329
||||
Sbjct 17599 GAAG 17596
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359975750528163
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |