Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq3646 95.1 3e-14
>seq3646
Length=8928
Score = 95.1 bits (104), Expect = 3e-14
Identities = 305/471 (65%), Gaps = 12/471 (3%)
Strand=Plus/Minus
Query 230173 TTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCGGGAGTTTC 230232
|| ||| |||||||||| |||| | ||||| |||||| | || || || |||
Sbjct 1348 TTCGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTC 1289
Query 230233 TGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAG 230292
|||| || ||||| ||| || | ||| ||||||| | |||||||||
Sbjct 1288 GCATCCATTTTCTGGCTTAAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAG 1229
Query 230293 TTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAAAGCTC 230352
|||| ||||||||||||||||| | |||| | || | | || | ||
Sbjct 1228 CTCATTTCCCGCGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCTCACCTT 1169
Query 230353 CAGAAC-----AAGCTACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAA 230407
| || |||| | || | | ||| || | ||||||| || || ||| |
Sbjct 1168 AAACACCGCCCAAGCAAGCA-----GGCCGTCCAAGACGTCATTACCGAGGCTGTTAGCA 1114
Query 230408 ACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAAC 230467
|| | |||||| | || || |||| ||| || | ||||||||||| |||
Sbjct 1113 TTGAGCAAGAGTTCCTGACCGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCC-AAC 1055
Query 230468 TT-ATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAG 230526
|| ||| || ||||| || ||||| |||||| | | || || | || || |||||
Sbjct 1054 TTGATGAAGCAATACATTGAGTTCGTCGCCGACAGGCTGCTTCTTTCTCTCGGCAACGAG 995
Query 230527 AAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAG 230586
|| | ||||| || ||||| || | || |||||| ||| || || || |||
Sbjct 994 AAGTTCTACAAATCGGCCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCCGGTAAG 935
Query 230587 ACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637
|| ||||||||||| ||||| ||| | ||||| || | | ||||||| |||
Sbjct 934 ACTAACTTCTTCGAGAAGCGCGTCGGCGACTACCAAAAGACTGGTGTCATG 884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057730752814400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |