Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq3646 132 6e-26
>seq3646
Length=8928
Score = 132 bits (146), Expect = 6e-26
Identities = 369/560 (66%), Gaps = 12/560 (2%)
Strand=Plus/Plus
Query 24135 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 24194
|| ||||| || ||| ||||||||||| | ||| | ||||| || || || ||
Sbjct 1188 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGG 1247
Query 24195 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 24254
|| | ||| ||||||||||| |||||||| || ||||| || || || ||||| ||||||
Sbjct 1248 CCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAA 1307
Query 24255 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGT 24311
|| || || || || || ||||||| || | | | | | | |||| ||
Sbjct 1308 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGG 1367
Query 24312 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 24371
|||||| | |||||||||||||||||| || | ||||| || ||||| || |||||
Sbjct 1368 ATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 1427
Query 24372 AAGAGATAGtttttttCA--TTACTATCTTTAACATATGTATCAATCAAAAGACTATACA 24429
||||| || | || | || | || || | ||||| ||||| | || ||
Sbjct 1428 AAGAGGTATGTGCGTTGAGCTTGC--TCCTTGATGTATGTGTCAATGAGGAGGGAGTATG 1485
Query 24430 TTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAA 24489
| || | |||||||| || || ||||| || |||||||| || | || || | |
Sbjct 1486 TCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 1545
Query 24490 TCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 24549
| || || || | | || || || | || || || || |||||||| || |
Sbjct 1546 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGG 1605
Query 24550 CAAAAAACGCCAATACATGTTTTATAAAATA---TTTTTCGTCTGGTG-TTAGTTTATTC 24605
| || || || | || || || || || | ||||| | || | || |||
Sbjct 1606 CGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTC-GTTGAGGCGGTTGTTC 1664
Query 24606 CAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCC 24665
|| || | || || || || | ||| | || || ||||||| || || ||||| |||
Sbjct 1665 CAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGAGGCCTCCGCC 1724
Query 24666 TTTTTATACATATTCCAGAT 24685
|| || ||||| | ||||||
Sbjct 1725 TTCTTGTACATCTGCCAGAT 1744
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593670539942400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |