Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq2985 91.5 2e-13 >seq2985 Length=1428 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/174 (72%), Gaps = 8/174 (5%) Strand=Plus/Plus Query 145996 AGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAG 146055 ||||| || |||||||| || ||| || |||| || |||||| ||| ||| ||||| Sbjct 1218 AGCTGATCAACGCCCTGTCCTGTGTAGTCCGTCTGGGCGTCCACATACTTGGCACCGAAA 1277 Query 146056 TGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCC----GGGCTCCCTGTGCCCCAG 146111 || | ||||||||| ||||| || || || ||||| || | || | ||||| || Sbjct 1278 TGGCGCCACTGGAAGCCGTAAACAGGGCCAAGGTCGCCCTCCGCGCGCTCTGTG----AG 1333 Query 146112 CCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC 146165 |||| | | ||| || | || || || ||| ||||||||||||||| ||| Sbjct 1334 CCCGATGCTATCAAGGTAGGCACGCGATCCATTGCCGTCCCAGATCTTGATGCC 1387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590026053395200