Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq977 104 4e-17
>seq977
Length=6114
Score = 104 bits (114), Expect = 4e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
||||| || ||| | ||||| || || ||||| || || || | ||| | ||| ||
Sbjct 4764 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 4823
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| || ||| | || || |||||||| || || ||||| || || || ||
Sbjct 4824 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 4883
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
|| | || ||||| ||||| || || || |||||| | || || || || || ||
Sbjct 4884 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 4943
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGTAT 124768
||||| || || || ||| ||||||||||| | ||| | || ||||||||
Sbjct 4944 ATTCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTCTTCGTGGTGGTAT 4993
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755391030784000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |