Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq499 257 1e-63
seq3646 176 4e-39
seq977 120 3e-22
seq498 105 6e-18
seq4873 98.7 9e-16
>seq499
Length=3129
Score = 257 bits (284), Expect = 1e-63
Identities = 568/848 (67%), Gaps = 3/848 (0%)
Strand=Plus/Plus
Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090
|||| || || ||||| ||||| || | | |||||| ||||| || || || || |
Sbjct 135 CAAG-TTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGTGCAAAGGT 193
Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150
|| | || || || | || |||||||||| || || ||||| | ||||||||
Sbjct 194 TGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGT 253
Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210
| |||||| | || | || ||||| || | ||||| || | ||| | |||
Sbjct 254 ACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAGCTTCT 313
Query 23211 GAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCA 23269
| || | | ||| || ||| || || |||||| | | ||| | ||| |||
Sbjct 314 GGGCCTTGATG-GTCTTGCGACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGCCTCA 372
Query 23270 AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC 23329
|| || | |||||| ||| |||| || || | | | || |||||||| ||||
Sbjct 373 AACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGTCCAG 432
Query 23330 ATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGT 23389
|| || ||||| || |||| || |||||||| ||||| |||||||||||||
Sbjct 433 TCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAG 492
Query 23390 TCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACG 23449
|| ||||| || || ||||| |||||| ||||||| |||| || | || || || ||
Sbjct 493 TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAAGACA 552
Query 23450 TCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGA 23509
||||| ||||| ||||||| ||| | ||| || || || || | ||| ||||| || ||
Sbjct 553 TCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGG 612
Query 23510 TCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCG 23569
|| ||||| | || ||||||||| | || | ||||| || |||| ||| || ||
Sbjct 613 TCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAGTTT 672
Query 23570 CCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATG 23629
||| || || | | ||| | || || | || | || || || ||
Sbjct 673 CCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCGATA 732
Query 23630 CCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATG 23689
|||||| | | || || ||||| || || || || ||||| ||||| ||||| ||
Sbjct 733 CCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCAATA 792
Query 23690 CTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCC 23749
|||||||| || | |||||||||| || || |||| || || | || ||| ||||
Sbjct 793 CTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCGGCA 852
Query 23750 GAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCG 23809
||| ||||| ||| ||||| || |||||| ||||| || ||||| || |||
Sbjct 853 TTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCG 912
Query 23810 ATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGA 23869
|| | ||||| ||||| ||||| || || | || || ||||| ||||||| ||
Sbjct 913 ATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATGTGCTGC 972
Query 23870 GGTCTCTC 23877
|| |||||
Sbjct 973 GGCCTCTC 980
>seq3646
Length=8928
Score = 176 bits (194), Expect = 4e-39
Identities = 487/738 (66%), Gaps = 23/738 (3%)
Strand=Plus/Minus
Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629
|| ||| | |||||||| ||||| || || || || ||||| | || || | || ||
Sbjct 1744 ATCTGGCAGATGTACAAGAAGGCGGAGGCCTCTTTCTGGACAGCAGAGGAGATTGATCTC 1685
Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686
|| ||||| || ||| ||| | || |||| || |||| | | || ||
Sbjct 1684 TCCAAGGACCTCCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATCTCC 1625
Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746
||||| | || || |||||||| || || || ||||| |||||||| | |||| |
Sbjct 1624 CACGTTCTCGCTTTCTTCGCCGCGTCGGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 1565
Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804
|| || || | || ||| | | || || | ||||| ||||| || ||| | |
Sbjct 1564 TT--CAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATTATGA 1507
Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAAC 57863
| || ||| | || | || | || || || ||||| || || ||| | ||||| |||
Sbjct 1506 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATTGACACATACATCAAGGAGCAAG 1447
Query 57864 GACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923
| | || || || ||||| || ||||| || || || ||| ||||||||
Sbjct 1446 CTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 1388
Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980
|| ||| | ||| ||||| || | || || | || |||||| || | || |
Sbjct 1387 GATTGGGCTGTCAGGTGGATCCAA---GACAAGGATTCTACCTTCGCCCAGCGTCTCGTT 1331
Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040
|| ||||| ||||| || ||||| ||||| || ||| ||| || | || || ||| |
Sbjct 1330 GCCTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTT 1271
Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100
||||| || ||||| ||| | ||||| || || |||||| | || || |||||||||
Sbjct 1270 AAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAG 1211
Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157
|||||||| ||||| || || ||||| | | ||||||| || | | |||| | |
Sbjct 1210 GGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCTCACCTT----AAACACCGCCCAAG 1155
Query 58158 C-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216
| | | | || ||| | || |||||||| || || || | ||||| | ||
Sbjct 1154 CAAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTTAGCATTGAGCAAGAGTTCCTGAC 1095
Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276
||| || || || || ||||||| |||||| | |||||| | ||||||||
Sbjct 1094 CGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 1035
Query 58277 GTTTGTTGCCGACAGACT 58294
||| || |||||||| ||
Sbjct 1034 GTTCGTCGCCGACAGGCT 1017
>seq977
Length=6114
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || ||||| ||||| || || ||||| || ||||| | || ||||| |||||
Sbjct 4536 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 4595
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | ||||| | || ||||||||| ||| | || || ||||||
Sbjct 4596 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 4655
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || |||||||| || ||| | || ||| ||| | |||||| |||
Sbjct 4656 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAAC 4715
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| || || ||||||||||| |||| ||| | || | || ||||
Sbjct 4716 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTA 4764
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| ||||| || |||||||| || ||||| ||||| || |||| || ||| | |||
Sbjct 4764 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 4823
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| | || || | || |||||||| || | || || ||||||
Sbjct 4824 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 4883
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
||||| || || ||||| ||||| |||||||| || || || || || |||
Sbjct 4884 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 4943
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || ||||| ||| |||| ||
Sbjct 4944 ATTCAGAAGGAGTCCACTCTGCATTTGGTTCT 4975
>seq498
Length=2934
Score = 105 bits (116), Expect = 6e-18
Identities = 411/643 (64%), Gaps = 15/643 (2%)
Strand=Plus/Plus
Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202
|||| || || || |||||||| ||||| || || | |||||| | ||| || || |
Sbjct 2168 TGGTACGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCAGCAAAGTGCATGG 2227
Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262
| || | || || | || | ||||| | |||| ||||| |||||| |
Sbjct 2228 ATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAA 2287
Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322
| || ||||| || || || ||||| | | | || ||| || || ||||| ||||
Sbjct 2288 TGAAGGCTCCACGGTCAGCAGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGG 2347
Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382
|||| || || | |||| || || || ||| | |||| ||| || |
Sbjct 2348 TCTTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGT 2407
Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442
| ||||| || || || | || ||||| ||| || || ||| || ||||
Sbjct 2408 CGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGA 2467
Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502
|| |||| || ||||| |||||||| | || ||| || || ||||||||| |
Sbjct 2468 GCAACCAGGGGTTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATGTTCG 2527
Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562
| ||| | || ||||| | || ||| || || ||||| | ||| || || || ||||
Sbjct 2528 AGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGGCA 2587
Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCAT 22620
| || || | || || ||||| | | ||||||| |||| | || ||| |
Sbjct 2588 TGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGT 2647
Query 22621 CGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC 22680
| |||||||||||| |||| || || || | ||||||| |||||||| | | ||||
Sbjct 2648 C--CCAGTCCCACAGGTCGGTAGGGGTAAC---GCCCCACATGTCGTATTGGAGCTCGCC 2702
Query 22681 GCGACTCG----CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTT 22736
|| | | || || |||||||| ||||||| |||| ||| ||| || |
Sbjct 2703 ----CTTGGATACTGGAGATCCCTCGTACGTCTCGTACGTGCCATGGATCTGGGCCAGCT 2758
Query 22737 CGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGAT 22779
| | || ||| || |||| || || ||||| |||||
Sbjct 2759 CTACGGAAGCAGTCAAAGCACCGTGGTAAATGGTCTCAAAGAT 2801
>seq4873
Length=13461
Score = 98.7 bits (108), Expect = 9e-16
Identities = 166/240 (69%), Gaps = 4/240 (2%)
Strand=Plus/Minus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || | ||
Sbjct 6386 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCATC 6327
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||||| | |||| | ||||| | || ||||||||| || | || || |||||
Sbjct 6326 CGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 6267
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
|||||| | || ||||| ||||| ||| | || || || | || || ||
Sbjct 6266 GCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAA 6207
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427
||| || || || || |||||||| |||| || ||||| | || ||| |||||||
Sbjct 6206 CATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGGTGCCAAGAAGCG 6147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445728064089600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |