Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq499 257 1e-63 seq3646 176 4e-39 seq977 120 3e-22 seq498 105 6e-18 seq4873 98.7 9e-16 >seq499 Length=3129 Score = 257 bits (284), Expect = 1e-63 Identities = 568/848 (67%), Gaps = 3/848 (0%) Strand=Plus/Plus Query 23031 CAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGAT 23090 |||| || || ||||| ||||| || | | |||||| ||||| || || || || | Sbjct 135 CAAG-TTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCTGTGCAAAGGT 193 Query 23091 TGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGT 23150 || | || || || | || |||||||||| || || ||||| | |||||||| Sbjct 194 TGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAAGCATCCTTGT 253 Query 23151 AGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCT 23210 | |||||| | || | || ||||| || | ||||| || | ||| | ||| Sbjct 254 ACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTACCAAAGCTTCT 313 Query 23211 GAGCGTGAACACGTCGCACGTACCTG-CCTTCTTCCTCGTACTTTTGGTACAACGCGTCA 23269 | || | | ||| || ||| || || |||||| | | ||| | ||| ||| Sbjct 314 GGGCCTTGATG-GTCTTGCGACCCTTTCCATCCCTCTCGTAGCTCTCGTAAAGCGCCTCA 372 Query 23270 AATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCCAC 23329 || || | |||||| ||| |||| || || | | | || |||||||| |||| Sbjct 373 AACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGGGCACATGAGGGTCCAG 432 Query 23330 ATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGT 23389 || || ||||| || |||| || |||||||| ||||| ||||||||||||| Sbjct 433 TCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAACAAG 492 Query 23390 TCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACG 23449 || ||||| || || ||||| |||||| ||||||| |||| || | || || || || Sbjct 493 TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAAGACA 552 Query 23450 TCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGA 23509 ||||| ||||| ||||||| ||| | ||| || || || || | ||| ||||| || || Sbjct 553 TCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACCTTGG 612 Query 23510 TCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCG 23569 || ||||| | || ||||||||| | || | ||||| || |||| ||| || || Sbjct 613 TCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAGTTT 672 Query 23570 CCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATG 23629 ||| || || | | ||| | || || | || | || || || || Sbjct 673 CCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCGATA 732 Query 23630 CCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATG 23689 |||||| | | || || ||||| || || || || ||||| ||||| ||||| || Sbjct 733 CCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCAATA 792 Query 23690 CTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCC 23749 |||||||| || | |||||||||| || || |||| || || | || ||| |||| Sbjct 793 CTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCGGCA 852 Query 23750 GAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCG 23809 ||| ||||| ||| ||||| || |||||| ||||| || ||||| || ||| Sbjct 853 TTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTATGTCTCG 912 Query 23810 ATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGA 23869 || | ||||| ||||| ||||| || || | || || ||||| ||||||| || Sbjct 913 ATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCATGTGCTGC 972 Query 23870 GGTCTCTC 23877 || ||||| Sbjct 973 GGCCTCTC 980 >seq3646 Length=8928 Score = 176 bits (194), Expect = 4e-39 Identities = 487/738 (66%), Gaps = 23/738 (3%) Strand=Plus/Minus Query 57570 ATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTG 57629 || ||| | |||||||| ||||| || || || || ||||| | || || | || || Sbjct 1744 ATCTGGCAGATGTACAAGAAGGCGGAGGCCTCTTTCTGGACAGCAGAGGAGATTGATCTC 1685 Query 57630 TCTAAGGATCTGAGCGATTGGGATTCCC---TCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || ||||| || ||| ||| | || |||| || |||| | | || || Sbjct 1684 TCCAAGGACCTCCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATCTCC 1625 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGA 57746 ||||| | || || |||||||| || || || ||||| |||||||| | |||| | Sbjct 1624 CACGTTCTCGCTTTCTTCGCCGCGTCGGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 1565 Query 57747 TTTTCACAAG--AAGTGCAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCA 57804 || || || | || ||| | | || || | ||||| ||||| || ||| | | Sbjct 1564 TT--CAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATTATGA 1507 Query 57805 TTGAAAACGTGCATTCAGAAATGTATTCGCTACTCATCGATACGTACGTGAAGGA-CAAC 57863 | || ||| | || | || | || || || ||||| || || ||| | ||||| ||| Sbjct 1506 TCGAGAACATTCACGCCGAGACATACTCCCTCCTCATTGACACATACATCAAGGAGCAAG 1447 Query 57864 GACGAGAAACGTAGACTGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCA 57923 | | || || || ||||| || ||||| || || || ||| |||||||| Sbjct 1446 CTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 1388 Query 57924 GAGTGGTCAATCAAATGGATAAAAAGCGCCACGG---CCACGTTCGCCGAGAGGCTAATC 57980 || ||| | ||| ||||| || | || || | || |||||| || | || | Sbjct 1387 GATTGGGCTGTCAGGTGGATCCAA---GACAAGGATTCTACCTTCGCCCAGCGTCTCGTT 1331 Query 57981 GCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATG 58040 || ||||| ||||| || ||||| ||||| || ||| ||| || | || || ||| | Sbjct 1330 GCCTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTT 1271 Query 58041 AAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAG 58100 ||||| || ||||| ||| | ||||| || || |||||| | || || ||||||||| Sbjct 1270 AAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAG 1211 Query 58101 GGTCTCCATACTGATTTTGCGTGCCTAATGTACTCTCACATTGTCAATAAACCG---ACG 58157 |||||||| ||||| || || ||||| | | ||||||| || | | |||| | | Sbjct 1210 GGTCTCCACACTGACTTCGCCTGCCTCCTCTTCTCTCACCTT----AAACACCGCCCAAG 1155 Query 58158 C-GGGATCGCATCTTGGACATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCAC 58216 | | | | || ||| | || |||||||| || || || | ||||| | || Sbjct 1154 CAAGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTTAGCATTGAGCAAGAGTTCCTGAC 1095 Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| || || || || ||||||| |||||| | |||||| | |||||||| Sbjct 1094 CGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGA 1035 Query 58277 GTTTGTTGCCGACAGACT 58294 ||| || |||||||| || Sbjct 1034 GTTCGTCGCCGACAGGCT 1017 >seq977 Length=6114 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| || ||||| ||||| || || ||||| || ||||| | || ||||| ||||| Sbjct 4536 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 4595 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | ||||| | || ||||||||| ||| | || || |||||| Sbjct 4596 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 4655 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || |||||||| || ||| | || ||| ||| | |||||| ||| Sbjct 4656 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAAC 4715 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| || || ||||||||||| |||| ||| | || | || |||| Sbjct 4716 ATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGTA 4764 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 ||||| ||||| || |||||||| || ||||| ||||| || |||| || ||| | ||| Sbjct 4764 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 4823 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 || | | |||| | || || | || |||||||| || | || || |||||| Sbjct 4824 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 4883 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 ||||| || || ||||| ||||| |||||||| || || || || || ||| Sbjct 4884 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 4943 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| ||| |||| || Sbjct 4944 ATTCAGAAGGAGTCCACTCTGCATTTGGTTCT 4975 >seq498 Length=2934 Score = 105 bits (116), Expect = 6e-18 Identities = 411/643 (64%), Gaps = 15/643 (2%) Strand=Plus/Plus Query 22143 TGGTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCG 22202 |||| || || || |||||||| ||||| || || | |||||| | ||| || || | Sbjct 2168 TGGTACGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCAGCAAAGTGCATGG 2227 Query 22203 ACGTCAATTTTCCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 | || | || || | || | ||||| | |||| ||||| |||||| | Sbjct 2228 ATGTGATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAA 2287 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | || ||||| || || || ||||| | | | || ||| || || ||||| |||| Sbjct 2288 TGAAGGCTCCACGGTCAGCAGCCATCTGGACGATGGTGCGCTGGGAGATCTCCCAGACGG 2347 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 |||| || || | |||| || || || ||| | |||| ||| || | Sbjct 2348 TCTTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGT 2407 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 | ||||| || || || | || ||||| ||| || || ||| || |||| Sbjct 2408 CGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGA 2467 Query 22443 CCAGATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGG 22502 || |||| || ||||| |||||||| | || ||| || || ||||||||| | Sbjct 2468 GCAACCAGGGGTTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATGTTCG 2527 Query 22503 ATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCA 22562 | ||| | || ||||| | || ||| || || ||||| | ||| || || || |||| Sbjct 2528 AGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGGCA 2587 Query 22563 TCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCT--TTGAAATTTTACTCTTGAGCAT 22620 | || || | || || ||||| | | ||||||| |||| | || ||| | Sbjct 2588 TGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGT 2647 Query 22621 CGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC 22680 | |||||||||||| |||| || || || | ||||||| |||||||| | | |||| Sbjct 2648 C--CCAGTCCCACAGGTCGGTAGGGGTAAC---GCCCCACATGTCGTATTGGAGCTCGCC 2702 Query 22681 GCGACTCG----CCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTT 22736 || | | || || |||||||| ||||||| |||| ||| ||| || | Sbjct 2703 ----CTTGGATACTGGAGATCCCTCGTACGTCTCGTACGTGCCATGGATCTGGGCCAGCT 2758 Query 22737 CGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGAT 22779 | | || ||| || |||| || || ||||| ||||| Sbjct 2759 CTACGGAAGCAGTCAAAGCACCGTGGTAAATGGTCTCAAAGAT 2801 >seq4873 Length=13461 Score = 98.7 bits (108), Expect = 9e-16 Identities = 166/240 (69%), Gaps = 4/240 (2%) Strand=Plus/Minus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 ||||||||| ||||| ||||| ||||| ||||| || |||||| | || || || | || Sbjct 6386 CATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCATC 6327 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| | |||| | ||||| | || ||||||||| || | || || ||||| Sbjct 6326 CGACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCA 6267 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 |||||| | || ||||| ||||| ||| | || || || | || || || Sbjct 6266 GCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAA 6207 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT----AGAAGCG 31427 ||| || || || || |||||||| |||| || ||||| | || ||| ||||||| Sbjct 6206 CATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGGTGCCAAGAAGCG 6147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445728064089600