Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq3646 98.7 2e-15
seq499 89.7 1e-12
>seq3646
Length=8928
Score = 98.7 bits (108), Expect = 2e-15
Identities = 157/225 (70%), Gaps = 3/225 (1%)
Strand=Plus/Minus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907
|||||||||||||| | |||||| | | ||||| ||| ||| | | || ||
Sbjct 1403 CATCAAGAAGAAGGCCGATTGGGCTGTCAGGTGGATCCAAGACAAGGATTCTACCTTCGC 1344
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
| | | |||||||| ||||| ||||| || || ||||| ||| | ||||||||
Sbjct 1343 CCAGCGTCTCGTTGCCTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATC 1284
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|||||||||| | ||||| | || | || |||| || |||| ||| || ||| ||||
Sbjct 1283 CATTTTCTGGCTTAAGAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAGCTCAT 1224
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072
||| | ||||| ||||| || ||||| || ||| | || ||
Sbjct 1223 TTCCCGCGACGAGGGTCTCCACACTGACTTCGCCTGCCTCCTCTT 1179
>seq499
Length=3129
Score = 89.7 bits (98), Expect = 1e-12
Identities = 175/256 (68%), Gaps = 2/256 (1%)
Strand=Plus/Plus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| ||||| || ||||| ||||| || || ||| || || ||||| ||||||
Sbjct 727 CCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCC 786
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGT 94904
||||| || || || | | | | | | |||||| || || || || | |||| |||
Sbjct 787 TCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGG-TGT 845
Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
|| ||| || ||||| |||||||| || || || || | |||||||| | ||
Sbjct 846 ACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACATGAGGTTGTA 905
Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024
||| || || | || || ||||||||||| || || ||||||||||||||
Sbjct 906 TGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACACGCATAATCAT 965
Query 95025 GTCCTGAGGGCGCTCA 95040
|| ||| || | ||||
Sbjct 966 GTGCTGCGGCCTCTCA 981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989496768170400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |