Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq499 154 2e-32
seq3646 134 2e-26
>seq499
Length=3129
Score = 154 bits (170), Expect = 2e-32
Identities = 562/870 (65%), Gaps = 16/870 (2%)
Strand=Plus/Plus
Query 62943 GCAACAGATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCA 63002
|||| ||||||| ||||||||||| ||||||| || | | | || | | |||||
Sbjct 124 GCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATCTCT 183
Query 63003 GTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 63062
|||||||| || | || || || | || | || || ||||| ||| ||
Sbjct 184 GTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTGCAA 243
Query 63063 GCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 63122
|||||||| || || ||||| || | || || ||| | |||| || | ||| | | |
Sbjct 244 GCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAGTAC 303
Query 63123 CAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTT---TCTCTTTCGTA--TAGA 63176
|| | | || | ||||| || | ||| | | || || || ||||| |
Sbjct 304 CAAA-GCTTCTGGGCCTTGATGGTC---TTGCGACCCTTTCCATCCCTCTCGTAGCTCTC 359
Query 63177 GTATACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGG 63235
||| || || || ||||| || || |||| | |||| | ||| || || | ||
Sbjct 360 GTA---AAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGG 416
Query 63236 ACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCA 63295
||||| | | ||| || |||| | || || || ||||| |||||||| || |||||
Sbjct 417 GCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCA 476
Query 63296 AAGAGC-TATAAATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGAT 63354
||||| || || || || | | | |||||| || || |||||| | | |
Sbjct 477 GAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGT 535
Query 63355 CGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCC 63414
| |||||| | | | ||| | ||||| || || | ||| ||||| | | | ||||| |
Sbjct 536 CTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGC 595
Query 63415 GTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAA 63474
| ||||| || || || || | |||||| || ||||| || | || | | ||| ||||
Sbjct 596 GCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAA 655
Query 63475 TAATACCGTTTGATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTAC 63534
||||| || || | || |||||||| | ||| || | ||| ||||||| ||| |
Sbjct 656 CGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGAT 715
Query 63535 TAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGT 63594
|| | || || || || || | || ||||| | || || || | ||||
Sbjct 716 GGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGT 775
Query 63595 CATAGATGCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGT 63654
||||||| || || || || || || |||||| | | || ||| |||| ||
Sbjct 776 CATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAG 835
Query 63655 GACGAGTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAA 63714
| | || || ||||| || | || || |||||||| || || |||| ||| |
Sbjct 836 CCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAAGACA 895
Query 63715 GTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACAC 63774
|| ||||| ||||| || | || |||||| ||||| || || || ||||
Sbjct 896 TGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCACCGCAACAC 955
Query 63775 GCATTAACATGTGCTGAGGTCTTTCAACAA 63804
|||| | ||||||||| || || ||| |||
Sbjct 956 GCATAATCATGTGCTGCGGCCTCTCAGCAA 985
>seq3646
Length=8928
Score = 134 bits (148), Expect = 2e-26
Identities = 179/248 (72%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641
|| ||||| || ||| ||||||||||| | ||| | |||||||| || || ||
Sbjct 1188 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGG 1247
Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701
|| | ||| ||||||||||| |||||||| || ||||| ||||| || || || |||||
Sbjct 1248 CCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAA 1307
Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33758
|| || || || ||||| ||||||| || | || | | | | |||| ||
Sbjct 1308 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGG 1367
Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818
|||||| | |||||||||||||||||| || | ||||| || || || ||||||||
Sbjct 1368 ATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 1427
Query 33819 AAGAGATA 33826
||||| ||
Sbjct 1428 AAGAGGTA 1435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629763435686400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |