Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq499 82.4 7e-11
>seq499
Length=3129
Score = 82.4 bits (90), Expect = 7e-11
Identities = 293/458 (64%), Gaps = 0/458 (0%)
Strand=Plus/Plus
Query 38092 TTCTTTCTTAAGCTTAGAAAATCGAATATATCAGCGTGCCATGGTTCTATATAAATCGAC 38151
|||||||| ||| ||| || || || | ||| ||||||||||| || | || || |
Sbjct 523 TTCTTTCTCAAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCG 582
Query 38152 ATTGCTCCTGGTCTTTTATCACCTCCCTGATTAATATATCTAACTGTGTTATTATATATT 38211
| || || || | || | || || || | || ||||| | ||||| || | |
Sbjct 583 AAAGCACCAGGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACG 642
Query 38212 CTTAACATAGGTACTATACCATTAGATTTGCCGTTTATACCGGATATATAAGTACCCTTA 38271
| | ||| || || |||||||| || || ||||| |||| | || || | ||| |
Sbjct 643 CGGAGCATGGGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTG 702
Query 38272 GCTCGTATATTACTTATCGACAATCCTATTCCACCTGCATGTTTTGATATTAAAGCGCAT 38331
|| || ||| | || |||||| || || || || ||||| || | || ||
Sbjct 703 GCACGGATACGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAG 762
Query 38332 TGTTTTAACGTATCAAATATACCTTCTATACTGTCATCCTTTATTGGTAGTATAAAACAA 38391
|| | || ||| | ||||| || |||||||| ||||| || | | || ||
Sbjct 763 GTCTTGAGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAG 822
Query 38392 CTAGACATTTGAGGCAATGGAGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAAC 38451
|||| |||| | ||| || ||||| || || | ||| || || || ||| ||||
Sbjct 823 GACGACAGCTGAGCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAG 882
Query 38452 CATTTTTCCGACAAATAATTATATGTTTCTATTACATCATCTATATCACCGCCGTGAATA 38511
|||| |||| || ||||| || ||| | || ||||| ||||||||||
Sbjct 883 TATTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATG 942
Query 38512 CCTAGAGATACCCTCATTAGCATATGTTGTGGTCTTTC 38549
|| | | || | ||| | ||| || || || || ||
Sbjct 943 CCCACCGCAACACGCATAATCATGTGCTGCGGCCTCTC 980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468484506867200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |