Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3646 116 5e-21
>seq3646
Length=8928
Score = 116 bits (128), Expect = 5e-21
Identities = 175/248 (71%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| || ||| |||||||| || | ||| | ||||| || || || ||
Sbjct 1188 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGG 1247
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|| | ||| ||||||||||| |||||||| || || || || || || ||||| |||||
Sbjct 1248 CCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAA 1307
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 42241
|| || || || || || ||||||| || | || | | | | |||| ||
Sbjct 1308 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGG 1367
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301
|||||| | |||||||||||||||||| || | ||||| || || || ||||||||
Sbjct 1368 ATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 1427
Query 42302 AAGAGATA 42309
||||| ||
Sbjct 1428 AAGAGGTA 1435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671081482028800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |