Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq3646 183 4e-41
seq499 145 1e-29
>seq3646
Length=8928
Score = 183 bits (202), Expect = 4e-41
Identities = 377/558 (68%), Gaps = 6/558 (1%)
Strand=Plus/Minus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| ||||||| || ||||| | || ||| | |||||
Sbjct 1744 ATCTGGCAGATGTACAAGAAGGCGGAGGCCTCTTTCTGGACAGCAGAGGAGATTGATCTC 1685
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||||| |||| ||| | | || | | || |||||| | || || ||
Sbjct 1684 TCCAAGGACCTCCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATCTCC 1625
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| || | || ||||| |||| || || ||||| |||||||| || || | ||
Sbjct 1624 CACGTTCTCGCTTTCTTCGCCGCGTCGGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 1565
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||| ||| | || ||||| | ||||| ||||| |||||||| |||||
Sbjct 1564 TTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATTATGATC 1505
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCGCAA 125318
|||||| | ||| | || | ||||| || ||||||| ||||| | | ||||
Sbjct 1504 GAGAACATTCACGCCGAGACATACTCCCTCCTCATTGACACATACAT---CAAGGAGCAA 1448
Query 125319 CGTAAA--CACAT-GCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGGCT 125375
| || ||||| ||||| || || ||||| || | || | || || |||||
Sbjct 1447 GCTCAACGCACATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCC 1388
Query 125376 CAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGGCA 125435
| |||| | |||||||| | ||| | | ||| | | |||| | | || || ||
Sbjct 1387 GATTGGGCTGTCAGGTGGATCCAAGACAAGGATTCTACCTTCGCCCAGCGTCTCGTTGCC 1328
Query 125436 TTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAG 125495
||||| ||||| ||||| || ||||| || || || || |||| || ||||| |||
Sbjct 1327 TTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTTAAG 1268
Query 125496 AAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGC 125555
||||| || |||||| | || || || | ||||||| | || || || ||||||||
Sbjct 1267 AAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAGGGT 1208
Query 125556 CTACACTGTGACTTTGCC 125573
|| ||| |||||| |||
Sbjct 1207 CTCCACACTGACTTCGCC 1190
>seq499
Length=3129
Score = 145 bits (160), Expect = 1e-29
Identities = 358/534 (67%), Gaps = 12/534 (2%)
Strand=Plus/Minus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATG-CAATGTCACG 96865
|| ||||| ||| | | ||| | || || |||||| | | | ||| || || || |
Sbjct 680 ACCAACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTG-CAAG 622
Query 96866 ATACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTG 96925
||||||| || || ||||| || || || || ||| | ||| ||||| | || || ||
Sbjct 621 ATACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCCATG 562
Query 96926 GCACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACG 96985
||||||||| || ||||| || | || || | || ||| ||| || || | ||
Sbjct 561 GCACGCGGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCG 502
Query 96986 AGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTC---AA 97042
||| | |||||||| || || |||||| | || ||| | ||||||||||| || ||
Sbjct 501 TGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAA 442
Query 97043 CGACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTG 97102
|||||| |||||| ||| ||||||||| || || || || || | || |
Sbjct 441 GAACGGTG---ACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCTGACGTTTA 385
Query 97103 GGGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGA-GGGCCGATACGTGAGAC 97161
||||| ||||||||||| ||| | ||||||| || || | || ||||
Sbjct 384 CGGCGATGAGTTTGAGGCGCTTTACGAGAGCTACGAGAGGGATGGAAAGGGTCGCAAGAC 325
Query 97162 GAGTCGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACT 97220
| || | || | |||| || ||| | |||| | |||||| ||||| ||||
Sbjct 324 CA-TCAAGGC-CCAGAAGCTTTGGTACTCCATTCTCGAGGCTCAAACTGAGACAGGAAAC 267
Query 97221 CCGTACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACC 97280
|| | ||| || ||||||||| | || ||||| |||||||| || | || |||
Sbjct 266 CCTTTCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACC 207
Query 97281 ATCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAG 97334
|| ||||||| || ||||| || ||||| |||||| | |||| || |||
Sbjct 206 ATTCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCTCCTGATGAG 153
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740995468908800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |