Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq977 89.7 4e-13
>seq977
Length=6114
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892
|||| |||| || |||||||| ||||| ||||| |||| || || | | ||||||
Sbjct 4972 ACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCATCCTCC 4913
Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952
| ||| || || || |||| || | |||||| ||| || | ||||| ||||| |
Sbjct 4912 AACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 4853
Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012
|| || || || | | ||| ||||||| | ||| |||| ||||| || ||
Sbjct 4852 ATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTG 4793
Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || | ||| ||||||||||| |||||
Sbjct 4792 CCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414538038070720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |