Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq977 89.7 4e-13 >seq977 Length=6114 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18833 ACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCC 18892 |||| |||| || |||||||| ||||| ||||| |||| || || | | |||||| Sbjct 4972 ACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCATCCTCC 4913 Query 18893 AGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCA 18952 | ||| || || || |||| || | |||||| ||| || | ||||| ||||| | Sbjct 4912 AACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 4853 Query 18953 ATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTA 19012 || || || || | | ||| ||||||| | ||| |||| ||||| || || Sbjct 4852 ATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTG 4793 Query 19013 CCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || | ||| ||||||||||| ||||| Sbjct 4792 CCCGTAAGAGTCTTGACAAAAATCTGCAT 4764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414538038070720