Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq977 98.7 8e-16
>seq977
Length=6114
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| ||||| || ||| |||||| ||||||||||| || | ||| || | ||||||
Sbjct 4972 ACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCATCCTCC 4913
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
| |||||| || || |||| | |||||||| ||| || | || |||||||| |
Sbjct 4912 AACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 4853
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| || ||| | | | || ||||||| || ||| ||||| || || || ||
Sbjct 4852 ATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTG 4793
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| || ||||||||||||||
Sbjct 4792 CCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 95.1 bits (104), Expect = 1e-14
Identities = 151/212 (71%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCA-ATTGTCGCTCGTCCTC 48576
|| || ||||| || |||||| |||||||||||||| | | | || || |||||||
Sbjct 4744 ACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGC-CGTCCTC 4686
Query 48577 CAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCAT 48636
||||||||||| || |||| | |||||||| ||| || | | |||||||||
Sbjct 4685 AAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTG 4626
Query 48637 AATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTT 48694
||| || ||||| | | || ||||| |||| ||||| ||| | || |||||
Sbjct 4625 AATCTTGGACTTGACGTTGTCG--ATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTC 4568
Query 48695 TTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| || ||||| || || || || ||||||||
Sbjct 4567 TTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 4536
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421215878086880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |