Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq4817 102 1e-16 >seq4817 Length=13321 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 19352 AAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGT 19411 || || ||| |||| ||||||||||| || ||| | | |||||| || || |||| Sbjct 6525 AAGATTCCTCAAATTGGTGATAAGTTCGCCTCTCGTCACGGTCAAAAGGGAACCATTGGT 6584 Query 19412 ATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATT 19471 || | ||| || |||||||| |||||||| ||| || ||||| ||||| || || ||| Sbjct 6585 ATCACTTACCGCCAAGAAGACATGCCTTTCACTCGCGAGGGTATTGTGCCTGACCTCATT 6644 Query 19472 ATTAACCCACATGCTTTTCCAAGTCGAATGACGCTT 19507 || ||||| || ||| |||| ||| |||||| || Sbjct 6645 ATCAACCCCCACGCTATTCCCTCTCGTATGACGATT 6680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595820755008000