Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq4858 116 6e-22
>seq4858
Length=6981
Score = 116 bits (128), Expect = 6e-22
Identities = 124/164 (76%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATG 16595
|| |||| ||||||| |||| ||| |||||| ||||||| || || |||| ||| |
Sbjct 1285 TGATCTACGAAGAGACCCGTGGTGTCCTGAAGACCTTCCTCGAGGGAGTCATCCGTGACG 1226
Query 16596 CTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATG 16655
| || ||| ||||||||||| || || ||||||||||||||| | ||| ||||||| |
Sbjct 1225 CCGTCACCTACACCGAGCACGCCAAGCGCAAGACTGTCACCTCCCTCGATGTCGTCTACG 1166
Query 16656 CATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
| | || ||||||||||| | | || ||||| || |||||
Sbjct 1165 CCCTCAAGCGTCAAGGCCGCACCCTGTACGGTTTCGGTGGTTAA 1122
Score = 95.1 bits (104), Expect = 2e-15
Identities = 83/101 (82%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||| || |||| ||| |||||| || |||||||| || ||||||||||| || ||
Sbjct 1442 GCCAAGCGCCACCGCAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCCGCCAT 1384
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || |||||||| || ||||||||| | ||||
Sbjct 1383 CCGCCGTCTCGCACGTCGTGGAGGTGTCAAGCGTATTTCTG 1343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79068909567840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |