Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_006998.1
Length=194711
Score E
Sequences producing significant alignments: (Bits) Value
seq499 163 4e-35
seq3646 140 4e-28
>seq499
Length=3129
Score = 163 bits (180), Expect = 4e-35
Identities = 743/1159 (64%), Gaps = 32/1159 (3%)
Strand=Plus/Plus
Query 62888 CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTAT 62947
|| ||||| ||||||| ||||| ||||| ||||||| || | | | || | | ||
Sbjct 120 CAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAAT 179
Query 62948 CTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTT 63007
||| |||||||| || | || || || | || | || || ||||| |||
Sbjct 180 CTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTT 239
Query 63008 ACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGC 63067
|| |||||||| || || ||||| || | || || ||| | |||| || | ||| |
Sbjct 240 GCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGA 299
Query 63068 TTTCCAGACGACTC-GAGCCTTTATTATAGATTTGTATCTCCTT---TCTCTTTCGTA-- 63121
| ||| | | || | ||||| || | ||| | | || || || |||||
Sbjct 300 GTACCAAA-GCTTCTGGGCCTTGATGGTC---TTGCGACCCTTTCCATCCCTCTCGTAGC 355
Query 63122 TAGTGTATACAATCGT-TCGAACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCAT 63180
| ||| || || || ||||| || || |||| | |||| ||||| || || |
Sbjct 356 TCTCGTA---AAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGT 412
Query 63181 CCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAA 63240
|| ||||| | | ||| || |||| | || || || ||||| |||||||| || |
Sbjct 413 TGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGA 472
Query 63241 TCCAAAGAGC-TATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTA 63299
|||| ||||| || || || || | || | |||||| || || |||||| |
Sbjct 473 TCCAGAGAGCGTAGAACAAG-TCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTC 531
Query 63300 AGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCA 63359
| || |||||| | | | ||| | ||||| || || | ||| ||||| | | | |||
Sbjct 532 AAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCA 591
Query 63360 GGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATT 63419
|| || ||||| || || || || | |||||| || ||||| || | || | | |||
Sbjct 592 GGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATG 651
Query 63420 GGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATA 63479
|||| ||||| || || | || |||||||| | ||| || ||| ||||||| |||
Sbjct 652 GGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATA 711
Query 63480 TTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAAC 63539
| || | || || || || || | || ||||| | || || || |
Sbjct 712 CGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGT 771
Query 63540 GTGTCATAGATACCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATT 63599
||||||||||||||||| || || || || |||||| | | || ||| ||||
Sbjct 772 GTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACA-- 829
Query 63600 TGGTGACGACT----AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTT 63655
| ||| | || || || ||||| || | || || |||||||| || || ||||
Sbjct 830 -GCTGA-GCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTT 887
Query 63656 TTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTAC 63715
||| | || ||||| ||||| || | || |||||| ||||| || ||
Sbjct 888 GGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATGCCCAC 947
Query 63716 TGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAA 63775
|| |||||||| | ||||||||| || || ||| | | ||| | | | | ||
Sbjct 948 CGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTT-TCCATCAAGACGGAGAA 1006
Query 63776 G-TAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCGTTCGTA 63832
| || ||| | |||| || || || ||||| || | ||| ||||| || || |||||
Sbjct 1007 GATACGATCTCTCCAGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAA--TCACGGTCGTA 1064
Query 63833 AATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATCCATGGTGATACTTGA 63892
|| | | |||||||| | || | || |||| | || || | |||
Sbjct 1065 AAGGACGGCAGAGTTGAGCTCGTCTGCGTGCTTCATAACGGTGTCATATGTCTTCTTTGC 1124
Query 63893 AATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCAC 63952
||| || || || | ||| || || || || || |||| | | | || | || ||
Sbjct 1125 AATCATGGGCGACGGCTTCGAGTTCTTGGGGTTTACGTAGTGGTACAGGTCGTAGATGAC 1184
Query 63953 TTCACTA-AATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTA 64011
| || | ||| | || || || | |||||| || || || ||||| || | || || |
Sbjct 1185 -TGACGAGAATTGCTTCTTCGTCTGCTTGTGAAGGTTCGACACGGCAATACGTGCAGCCA 1243
Query 64012 GAATGGCATAATCCGGATG 64030
| |||||||| || || ||
Sbjct 1244 GGATGGCATAGTCTGGGTG 1262
>seq3646
Length=8928
Score = 140 bits (154), Expect = 4e-28
Identities = 180/248 (73%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363
|| ||||| || ||| ||||||||||| | ||| || ||||| || || || ||
Sbjct 1188 CAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGG 1247
Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423
|| | ||| ||||||||||| |||||||| || ||||| ||||| || ||||| |||||
Sbjct 1248 CCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAA 1307
Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480
|| || || || ||||| ||||||| || | || | | | | |||| ||
Sbjct 1308 ATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGG 1367
Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540
|||||| | |||||||||||||||||| || | ||||| || || || ||||||||
Sbjct 1368 ATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTG 1427
Query 33541 AAGAGATA 33548
||||| ||
Sbjct 1428 AAGAGGTA 1435
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 622893626540800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |