Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq977 131 2e-25
seq4873 116 3e-21
seq4907 111 1e-19
seq498 91.5 1e-13
>seq977
Length=6114
Score = 131 bits (144), Expect = 2e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | ||||| || |||||||| |||||||||||||| |
Sbjct 5218 CCACCGCGGAGACGGAGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGAC 5159
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || ||||||||||||||||| || | |||| |||||||||||||| |||
Sbjct 5158 AGAGTACGGCCATCCTCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGG 5099
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| || ||||| | || | ||||| | |||||||
Sbjct 5098 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACC 5039
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| || || ||||| ||||| || ||||| || |||||
Sbjct 5038 TCCAACGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || ||||| | || |||||||| ||||||||||| || |
Sbjct 4990 CCACCACGAAGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGAC 4931
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| | ||||||||||||| | || | |||||||||||||||||
Sbjct 4930 AAGGTGCGGCCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 4871
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||| | | || | |||||||| || || |
Sbjct 4870 ATACCCTCCTTGTCTTGAATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACC 4811
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| || || || || ||||| || || |||||||||||
Sbjct 4810 TCGAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || || || | ||||||||||| |||||||||||||||
Sbjct 4762 CCACCACGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAG 4703
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| | || | |||||||||||||||||
Sbjct 4702 AGAGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 4643
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || |||| ||||| |
Sbjct 4642 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCAACC 4583
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || || || || || || ||||| ||||||||
Sbjct 4582 TCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTGCAT 4536
Score = 109 bits (120), Expect = 5e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||| || || || || | || |||||||| || |||||||| |||
Sbjct 4534 CCACCACGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 4475
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| || |||||||| ||| |||| | ||| ||||||||||| ||
Sbjct 4474 AGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGA 4415
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
||||| || ||||| || || ||| | | || | ||||||| ||||||||
Sbjct 4414 ATTCCCTCCTTGTCTTGAATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACC 4355
Query 131188 TCGACGGTAACGGTTTTACCGGT 131210
|| | ||| | ||| || || ||
Sbjct 4354 TCAAGGGTGATGGTCTTGCCAGT 4332
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| ||||| || || | ||| |||||| || |||||||| |||||
Sbjct 5447 GCCACCACGAAGACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCT 5388
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| || | ||||| || ||||| || || |||| | |||||||||||||| ||
Sbjct 5387 CAGCGTCCTTCCATCCTCGAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGG 5328
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || || || || || ||||| | || | || || | ||||| |
Sbjct 5327 GATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAAC 5268
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| |||| || || || || || || || ||||||||||||||
Sbjct 5267 CTCGAGAGTAATAGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 5220
>seq4873
Length=13461
Score = 116 bits (128), Expect = 3e-21
Identities = 156/217 (72%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 131022 CAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTC 131081
||| || || || | || |||||||| || |||||||| || | |||||| ||
Sbjct 6173 CAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATC 6232
Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141
||| ||||||||||| ||| |||| || |||||||||||||| || ||||| || |||||
Sbjct 6233 CTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTC 6292
Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201
||| || ||||| | || | ||| |||| ||||| | || | ||| | ||
Sbjct 6293 CTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCCACCTCAAGGGTGATAGT 6352
Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|| || || || || || ||||| || |||||||||
Sbjct 6353 CTTGCCCGTCAGGGTCTTCACGAAGATTTGCATGACT 6389
>seq4907
Length=24529
Score = 111 bits (122), Expect = 1e-19
Identities = 133/181 (73%), Gaps = 0/181 (0%)
Strand=Plus/Minus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| | |||||| ||||| ||||||||||| || |||
Sbjct 4491 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 4432
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| | ||||||||||||||||| ||||| || ||||| ||| ||| ||||| | |
Sbjct 4431 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 4372
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | |||||||| |||||||| || | ||| | ||| || || || | || || ||||
Sbjct 4371 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 4312
Query 131225 A 131225
|
Sbjct 4311 A 4311
>seq498
Length=2934
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
|| || || || |||||||| |||| ||||||||| | || | ||| || ||| | ||
Sbjct 2479 TTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATGTTCGAGGTGTATGGC 2538
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || ||||||| ||| || || || | ||| | || ||||||||| || ||
Sbjct 2539 TCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCAACG 2598
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| | || ||||| | ||||||| |||||| | |||| || | |||| |||||
Sbjct 2599 AGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCAC 2658
Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTG 145272
|| || || | ||| ||||||||||||| ||
Sbjct 2659 AGGTCGGTAGGGGTAACGCCCCACATGTCGTATTG 2693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471972206899200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |