Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq887 87.8 4e-12 >seq887 Length=5960 Score = 87.8 bits (96), Expect = 4e-12 Identities = 103/137 (75%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 280702 CTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA- 280760 ||||||| ||||| ||||| || || || ||| ||||| | ||| ||| || Sbjct 2357 CTCACTCCCGCATGTTGGGTCTCTCCGGTGGTCAGCGTGTCAAGGTCGTCCTCGCCGCCT 2416 Query 280761 GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGC 280820 |||| |||||| | |||||| |||||||||| || |||||||||||||| |||||||| Sbjct 2417 GCTC-GTGGCAGCGTCCTCACCTGATCGTTCTTGATGAGCCTACCAACTACCTGGACCGT 2475 Query 280821 GAGAGCCTGGGCGCTCT 280837 || ||| || ||||| Sbjct 2476 GACTCCCTTGGTGCTCT 2492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027746196186080