Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq977 89.7 4e-13
>seq977
Length=6114
Score = 89.7 bits (98), Expect = 4e-13
Identities = 154/221 (70%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || |||| ||| || ||| |||||||||||||||||| || | ||| ||
Sbjct 4981 AGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGG 4922
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
| || ||||| |||||||| || || |||||||||||||| ||| || | | |||
Sbjct 4921 CCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCC 4862
Query 34030 TTGTCCATAATTTTTTGCTTA--ATGGAACTC-ACACTATCAGTAGATTCGCATTCGACC 34086
||||| ||| || |||| || | || | | |||| | ||||| |||| |
Sbjct 4861 TTGTCTTGAATCTTGCTCTTAACATTG---TCGATAGTATCGGATGATTCCACCTCGAGC 4805
Query 34087 GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
|| || || || || || || || || ||||| || |||||
Sbjct 4804 GTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 82.4 bits (90), Expect = 6e-11
Identities = 149/218 (68%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 33910 AGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCCAATTGTCGC 33969
|| || || || ||||| | ||| ||||||||||||||||||||| | || ||
Sbjct 5209 AGACGGAGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGACAGAGTACGG 5150
Query 33970 TCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGCACGCTCTCT 34029
| || || | |||||||| ||||| || ||||||||||| ||| || | || |||
Sbjct 5149 CCATCCTCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCC 5090
Query 34030 TTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCATTCGACCGTT 34089
|| || || || ||| | | | | |||| | || ||| || | |||
Sbjct 5089 TTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACCTCCAACGTA 5030
Query 34090 ATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
||||| |||||||| || || || || |||||||||||
Sbjct 5029 ATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397029106317760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |