Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq977 118 3e-21
seq4907 98.7 2e-15
seq3646 84.2 5e-11
>seq977
Length=6114
Score = 118 bits (130), Expect = 3e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || || | || || | |||| ||||| || || ||||| || ||||||
Sbjct 5449 TGGCCACCACGAAGACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCG 5390
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
||||| | ||| || || | ||| || || || |||||||| ||||| || |
Sbjct 5389 CTCAGCGTCCTTCCATCCTCGAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGT 5330
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| || || |||||||| || || | || ||||| || || | || || ||
Sbjct 5329 GGGATACCCTCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCA 5270
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| ||||| || || ||||| || ||||| ||||||||||| ||||||||
Sbjct 5269 ACCTCGAGAGTAATAGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 5220
Score = 104 bits (114), Expect = 6e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || || ||||| | ||| || || || || || || || |
Sbjct 5218 CCACCGCGGAGACGGAGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGAC 5159
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || |||| || || || || || || || ||||| || ||||
Sbjct 5158 AGAGTACGGCCATCCTCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGG 5099
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || ||||| ||||| || | || ||||| || || | ||| ||| || ||
Sbjct 5098 ATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACC 5039
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| | ||| || ||||| ||||| |||||||||||||| || |||||
Sbjct 5038 TCCAACGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
Score = 102 bits (112), Expect = 2e-16
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || | ||| | ||| || || || || || ||||| |
Sbjct 4990 CCACCACGAAGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGAC 4931
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| ||||| || || || || || || |||||||| ||||| ||||| || ||
Sbjct 4930 AAGGTGCGGCCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 4871
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || || || || || || ||| || || || || |||| |||| ||||| ||
Sbjct 4870 ATACCCTCCTTGTCTTGAATCTT-GCTCTTAACATTGTCGATAGTATCGGATGATTCCAC 4812
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|||||||| |||||||| || || ||||||||||| || ||||||||
Sbjct 4811 CTCGAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 89.7 bits (98), Expect = 1e-12
Identities = 126/173 (73%), Gaps = 8/173 (5%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| || ||||| || ||||||| ||| ||||| ||||| || | ||| || || ||||||
Sbjct 4498 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAG 4439
Query 288343 ATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTCGCT-TTCAC 288398
|||||||| || || || ||| ||||| || || || || || || ||| || ||
Sbjct 4438 ATCAGACGTTGCTG---GTCCGGGGGAATTCCCTCCTTGTCTTGAATCTT-GCTCTTAAC 4383
Query 288399 GTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA 288451
||| || || | |||| || || || || || ||||| ||||| || ||||
Sbjct 4382 GTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 4330
>seq4907
Length=24529
Score = 98.7 bits (108), Expect = 2e-15
Identities = 129/179 (72%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 288286 TTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATC 288345
|| ||||| || ||||||| || |||||||| || || | || || || || ||||||
Sbjct 4489 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 4430
Query 288346 AGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCT 288405
|| ||||| || || ||||| || || || ||||| |||| || || || ||
Sbjct 4429 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 4370
Query 288406 ATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|||| |||| || || || || || ||||| ||||| || |||| |||||||||||
Sbjct 4369 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 4311
>seq3646
Length=8928
Score = 84.2 bits (92), Expect = 5e-11
Identities = 155/225 (69%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 269117 AAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTCATGA 269176
|||||||| | || || | || ||| | || |||| ||||| ||| | | ||||
Sbjct 1107 AAGAGTTCCTGACCGAGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGA 1048
Query 269177 ATCAATATATCGAATTCGTGGCTGATCGTAT-CTTCACGGCACTCGGTTATGAGAAAGTG 269235
| ||||| || || ||||| || || | | |||| | ||||| | ||||| |
Sbjct 1047 AGCAATACATTGAGTTCGTCGCCGACAGGCTGCTTCTTT-CTCTCGGCAACGAGAAGTTC 989
Query 269236 TACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACGAAC 269295
||||| ||| || || |||| ||| ||||| || || || | || ||||| |||
Sbjct 988 TACAAATCGGCCAACCCATTCGACTTCATGGAGAACATCTCCCTGGCCGGTAAGACTAAC 929
Query 269296 TTCTTCGAAAAGCGTGTCAGCGACTATCAACGTCCTGGTGTAATG 269340
|||||||| ||||| ||| ||||||| ||| ||||||| |||
Sbjct 928 TTCTTCGAGAAGCGCGTCGGCGACTACCAAAAGACTGGTGTCATG 884
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179550413464640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |