Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq499 179 4e-40 seq3646 134 2e-26 seq498 129 7e-25 >seq499 Length=3129 Score = 179 bits (198), Expect = 4e-40 Identities = 605/928 (65%), Gaps = 27/928 (3%) Strand=Plus/Plus Query 114398 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACA 114457 ||||||| ||||| || |||||||| | | | || | ||| | | || ||| Sbjct 52 ACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATATCAACA 111 Query 114458 TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTAC 114517 ||| | || ||||| | || |||| |||||||| | |||||| | ||| |||| Sbjct 112 TACGTTGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTAC 171 Query 114518 TCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 114577 || | ||| || || || | || || || |||||| || | |||||| || || | Sbjct 172 TCGACAATCTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTC 231 Query 114578 TTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTG 114637 || ||| || ||||||||||| |||||| | || | || ||||| ||||| | || | Sbjct 232 TTGCGGTTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCG 291 Query 114638 AGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTC 114693 ||||| | | ||| | | || | | || | ||| ||| | | || ||| Sbjct 292 AGAATGGAGTACCAAAGCTTCTGGGCCTTG----ATGGTCTTGCGACCCTTTCCATCCCT 347 Query 114694 CTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGC 114753 |||||| | ||| || || |||||||| || || | || | | ||| || Sbjct 348 CTCGTAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCA 407 Query 114754 CTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTC 114813 || | ||||| | ||| | ||| | ||| || ||||||||||||||||||||| || Sbjct 408 CTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATC 467 Query 114814 TGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 114873 |||||||||||||| |||| | || || || |||| || | || || || Sbjct 468 CGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTT 527 Query 114874 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 114933 | ||| || | || || | || |||||||||||| || || | ||| | |||| | Sbjct 528 TCTCAAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGC 587 Query 114934 CCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCG 114987 || | | || ||| | |||| || || || || ||| || || ||||| Sbjct 588 ACC---AGGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCG 644 Query 114988 AAGCATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTATTG 115045 ||||| |||| |||||||| || | || || || || ||| || | || | || Sbjct 645 GAGCATGGGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATG-CAC-CAGTG 702 Query 115046 GCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCAC 115105 || | || | |||||||| || || ||||| || || ||||||||| || || Sbjct 703 GCACGGATACGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAG 762 Query 115106 TCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAG 115165 | |||| || | ||||| || || || ||| |||| | ||| | ||||||| Sbjct 763 GTCTTGAGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAG 822 Query 115166 CTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAAC 115225 ||||| || | | ||||||||| || |||||||| ||||| | ||||| |||| Sbjct 823 GACGACAGCTGAGCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA- 881 Query 115226 ATACCTTGG--GACATCTTATCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGA 115282 || |||| ||||| | ||| ||||| | | | | ||| || || |||||| Sbjct 882 GTA-TTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTC-TCAATATCCTCGCCGTGA 939 Query 115283 ATACCGATCGAGACCCGCATAAACATGT 115310 || || | || || ||||||| ||||| Sbjct 940 ATGCCCACCGCAACACGCATAATCATGT 967 >seq3646 Length=8928 Score = 134 bits (148), Expect = 2e-26 Identities = 341/510 (67%), Gaps = 9/510 (2%) Strand=Plus/Plus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||||||||||||||| ||||| ||||| || || |||||| || || | |||||| || Sbjct 1202 GTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGCCAGCCATGAGGCC 1261 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | ||||||||| | || || || |||||||| || ||||| || Sbjct 1262 ACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAATACCCTCAACGGC 1321 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGT-GTCAAACCACTTCATCG 126236 ||||| |||| |||||||| || |||| | | |||| | | |||| | | | Sbjct 1322 AGCGAAGGCAACGAGACGCTGGGCGAAGG-TAGAATCCTTGTCTTGGATCCACCTGACAG 1380 Query 126237 CCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 126296 |||| | ||||| |||| ||| || || | ||||| ||| || | ||||| | | Sbjct 1381 CCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 1440 Query 126297 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 126356 || | | | || |||||||| | || ||||| || ||||| ||| |||| | Sbjct 1441 GTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTATGTCTCGGCGTGAATGT 1500 Query 126357 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 126415 | || || || || || ||||||| |||| ||||| || || ||||| | Sbjct 1501 TCTCGATCATAATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 1558 Query 126416 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 126474 || || | | || ||||| |||||||| || ||| | || || || || || Sbjct 1559 GCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGGCGAAGAAAGCGAG 1618 Query 126475 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCAAGATC 126531 | | ||||| | | |||| ||||| | || | |||||||||| || || Sbjct 1619 AACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTGGAGGTC 1678 Query 126532 CTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||| |||||||| | |||||| || ||||| Sbjct 1679 CTTGGAGAGATCAATCTCCTCTGCTGTCCA 1708 >seq498 Length=2934 Score = 129 bits (142), Expect = 7e-25 Identities = 324/489 (66%), Gaps = 14/489 (3%) Strand=Plus/Plus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 |||||||||||||| || |||||||| || |||||||| || | ||||| || | Sbjct 2173 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCAGCAAAGTGCATGGATGTG 2232 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| | |||||| | |||| || ||| | | ||||| ||||| |||||| Sbjct 2233 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATGAAG 2292 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 113773 |||||| || || ||||| | | | | | | || | || ||||| || || Sbjct 2293 GCTCCACGGTCAGCAGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 2349 Query 113774 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCC 113833 | |||||| ||| || || | ||||| | ||| |||||||||||||| || | Sbjct 2350 TTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGTCG 2409 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCT----C 113889 || ||| | | |||||| | | ||||| ||||| || | | |||| | Sbjct 2410 GCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGAGC 2469 Query 113890 CACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATT 113949 || || | || ||||| ||||| || || ||| || | | || || || Sbjct 2470 AACCAGGGG----TTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATGTT 2525 Query 113950 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGG 114009 | ||||||||||| |||||||| ||| || | || |||| ||||||||| ||||| Sbjct 2526 CGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGG 2585 Query 114010 CATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGC 114069 ||||||||| | ||| || ||| |||| ||| | | | | || | ||||||| | Sbjct 2586 CATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGA 2645 Query 114070 GTCCCAGTC 114078 ||||||||| Sbjct 2646 GTCCCAGTC 2654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597302227590400