Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq977 105 7e-18
seq4907 102 8e-17
seq4873 96.9 3e-15
>seq977
Length=6114
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| ||||| || || |||||||||||||| | || ||||| |||| |||||||||
Sbjct 4738 TGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCCTCAAGCTGC 4679
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| || || |||| || ||||||||||| |||||||| || || || || || || ||
Sbjct 4678 TTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTG 4619
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| || || | || || | || || || | ||| | ||||||||| ||
Sbjct 4618 GACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTG 4559
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
| || || ||||| || |||||
Sbjct 4558 AGGGTCTTAACGAAGATCTGCAT 4536
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || ||||||||||| || | | |||||| | || || | |||||||||
Sbjct 4960 GTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCATCCTCCAACTGCTTGCCT 4901
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| |||| || ||||||||||| |||||||| || || || ||||| || || |||
Sbjct 4900 GCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAATCTTGCTCTTA 4841
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | ||||| | ||||| || | || | |||||||| || | |||
Sbjct 4840 ACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTGCCCGTAAGAGTC 4781
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 4780 TTGACAAAAATCTGCAT 4764
Score = 98.7 bits (108), Expect = 1e-15
Identities = 161/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | || || ||||| | || || || || |||||||||||||| |
Sbjct 5219 ACCACCGCGGAGACGGAGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGA 5160
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || || | || || ||||||||||| ||| |||| || ||||||||||| || ||
Sbjct 5159 CAGAGTACGGCCATCCTCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGG 5100
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCC 64393
|| || || || ||||| || || ||| || || | |||| ||| || ||
Sbjct 5099 GATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTAT--CCGACGACTCG 5042
Query 64394 ACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || | || | ||||| ||||| | ||| || ||||| ||||||||
Sbjct 5041 ACCTCCAACGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
Score = 91.5 bits (100), Expect = 1e-13
Identities = 125/175 (71%), Gaps = 0/175 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || |||||| |||| ||||| |||||||||
Sbjct 4504 GTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCG 4445
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
|| | || || || |||||||| || |||||||| || || ||||| || || |||
Sbjct 4444 GCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGAATCTTGCTCTTA 4385
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCA 64421
|| || | ||||| || || || || | || | ||||||||| ||||
Sbjct 4384 ACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 4330
>seq4907
Length=24529
Score = 102 bits (112), Expect = 8e-17
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 64256 TTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATG 64315
|| || |||||||| || | | |||||| | || || ||||||||||| ||| | ||
Sbjct 4489 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 4430
Query 64316 AGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCC 64375
|| ||||||||||| ||||||||||| || || ||||| || || ||| ||| ||
Sbjct 4429 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 4370
Query 64376 ACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAA 64434
| ||||| || || || || | || | ||||||||| ||||| || || |||||
Sbjct 4369 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 4311
>seq4873
Length=13461
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || || | ||| || || | |||| || || || || || |||||||| || |
Sbjct 6158 ACCTCCACGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 6217
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| |||||| | || || |||||||||||||| | || | ||||||||||| || ||
Sbjct 6218 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGG 6277
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|||||| || || || || || || ||| ||| || | || || | |||||
Sbjct 6278 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCCAC 6337
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | || | |||||||| |||| || || ||||| ||||||||
Sbjct 6338 CTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTGCAT 6385
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499601830547200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |