Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq499 232 7e-56 seq498 131 2e-25 >seq499 Length=3129 Score = 232 bits (256), Expect = 7e-56 Identities = 609/921 (66%), Gaps = 10/921 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || ||||||| ||||| || ||| | ||||| Sbjct 1049 AACTACCAATACTTTGGCTTCAAGACACTGGAGAGATCGTATCTTCTCCGTCTTGATGGA 990 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | |||| | ||| | ||||| || || | ||||| || || | || ||||||||| | Sbjct 989 AAGGTTGCTGAGAGGCCGCAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAG 930 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 || || ||| | | | | || |||| ||| | || || Sbjct 929 GATATTGAGAAGACAATCGAGACATACAACCTCATGTCTTCCAAATACTTCACACACGCT 870 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953 |||| || || ||||| || || || || | | ||| |||| || || ||| || | Sbjct 869 TCCCCAACACTCTTCAATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTC 810 Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013 ||| | |||| ||| || || || | |||| |||||| |||||| | || Sbjct 809 GAC-ATGAAGGAGGACAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGAT 751 Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071 |||||| ||| || || ||||| | | |||| |||| ||||||| ||| | Sbjct 750 CTCAAAGACCGCCGGAGGTATCGGATTGAACATCCAT--CGTATCCGTGCCACTGGTGCA 693 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| |||||||| || | ||| || || |||| || |||||||| ||||||||| Sbjct 692 TACATCGCTGGTACCAACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAAC 633 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| | || | ||||| ||||| ||||| | | | ||| ||||||| |||| Sbjct 632 AACACTGCAAGATACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTAC 573 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251 ||||||| ||||||||||| || | ||| | ||| || |||||||||||||||| Sbjct 572 GTCGAGCCATGGCACGCGGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAG 513 Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 || | | ||| | ||| | ||||||||||||||| | || || || || ||||| Sbjct 512 GAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAG 453 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || || ||||| ||| | ||||| || | || ||||| || || || || || | Sbjct 452 CGTGTTGAGAAGAACGGTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCT 393 Query 94372 GACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429 ||||||| | ||| | | ||||| | | || | | ||||| | | || |||| Sbjct 392 GACGTTTACGGCGAT-GAG-TTTGAGGCGCTTTACGAGAGCTACGAGAGGGATGGAAAGG 335 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | ||| || | || |||||| ||| | || | || | || |||| Sbjct 334 GTCGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGGCTCAAACTGAGA 275 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || | || | ||| ||| |||||| || |||| |||| ||||||| || ||| Sbjct 274 CAGGAAACCCTTTCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACC 215 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 |||| || ||||| || || ||||| |||||||||||||| || |||| || | Sbjct 214 TCGGTACCATTCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCTCCTGATG 155 Query 94610 AGATTGCTGTGTGTAACCTGG 94630 || |||| ||||||||| ||| Sbjct 154 AGGTTGCCGTGTGTAACTTGG 134 >seq498 Length=2934 Score = 131 bits (144), Expect = 2e-25 Identities = 212/302 (70%), Gaps = 10/302 (3%) Strand=Plus/Minus Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136 |||||||| ||| | ||||| || || ||||||||||| |||||||| | ||||| Sbjct 2621 CACGGTGTCCGCAACTCTCTGCTCGTTGCACCCATGCCCACTGCCTCCACCTCCCAGATT 2562 Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196 || ||| |||||||| ||||| || | |||||| ||| | ||| | || || || Sbjct 2561 CTCGGCTTCAACGAGTGCTTCGAGCCATACACCTCGAACATTTACTCGCGTCGTGTCCTG 2502 Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTG 95254 || || || |||| || | ||| | || |||| || ||| | ||||| Sbjct 2501 GCTGGCGAGTTCCAAGTTGTTAACCCCTGGTTGCTCAAGGACTTG--GTCGATATGGGTC 2444 Query 95255 TGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGG---CTCCGTCCAGAACA 95311 ||||| |||||| | ||||||| | | |||| |||| |||| |||| |||| Sbjct 2443 TGTGGTCTGACAACATGAAGAACCGCATCAT---CGCCGACGGAGGCTCCATCCAAAACA 2387 Query 95312 TCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGC 95371 |||| | || || | ||||||||||| ||||| |||||||| ||||||||| | |||| Sbjct 2386 TCCCCAACATCCCTGCCGACATCAAGGCCCTCTATAAGACCGTCTGGGAGATCTCCCAGC 2327 Query 95372 GC 95373 || Sbjct 2326 GC 2325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494680653804800