Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq499 232 7e-56
seq498 131 2e-25
>seq499
Length=3129
Score = 232 bits (256), Expect = 7e-56
Identities = 609/921 (66%), Gaps = 10/921 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | ||||||| |||||| || ||||||| ||||| || ||| | |||||
Sbjct 1049 AACTACCAATACTTTGGCTTCAAGACACTGGAGAGATCGTATCTTCTCCGTCTTGATGGA 990
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| |||| | ||| | ||||| || || | ||||| || || | || ||||||||| |
Sbjct 989 AAGGTTGCTGAGAGGCCGCAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAG 930
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
|| || ||| | | | | || |||| ||| | || ||
Sbjct 929 GATATTGAGAAGACAATCGAGACATACAACCTCATGTCTTCCAAATACTTCACACACGCT 870
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT- 93953
|||| || || ||||| || || || || | | ||| |||| || || ||| || |
Sbjct 869 TCCCCAACACTCTTCAATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTC 810
Query 93954 GACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCAT 94013
||| | |||| ||| || || || | |||| |||||| |||||| | ||
Sbjct 809 GAC-ATGAAGGAGGACAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGAT 751
Query 94014 CTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTA--CGTGCCAGGGGTTCC 94071
|||||| ||| || || ||||| | | |||| |||| ||||||| ||| |
Sbjct 750 CTCAAAGACCGCCGGAGGTATCGGATTGAACATCCAT--CGTATCCGTGCCACTGGTGCA 693
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
|||||| |||||||| || | ||| || || |||| || |||||||| |||||||||
Sbjct 692 TACATCGCTGGTACCAACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAAC 633
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || | ||||| ||||| ||||| | | | ||| ||||||| ||||
Sbjct 632 AACACTGCAAGATACGTTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTAC 573
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
||||||| ||||||||||| || | ||| | ||| || ||||||||||||||||
Sbjct 572 GTCGAGCCATGGCACGCGGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAG 513
Query 94252 GATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|| | | ||| | ||| | ||||||||||||||| | || || || || |||||
Sbjct 512 GAGGAAGTCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAG 453
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| || ||||| ||| | ||||| || | || ||||| || || || || || |
Sbjct 452 CGTGTTGAGAAGAACGGTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCT 393
Query 94372 GACGTTT--GTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGG 94429
||||||| | ||| | | ||||| | | || | | ||||| | | || ||||
Sbjct 392 GACGTTTACGGCGAT-GAG-TTTGAGGCGCTTTACGAGAGCTACGAGAGGGATGGAAAGG 335
Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
| ||| || | || |||||| ||| | || | || | || ||||
Sbjct 334 GTCGCAAGACCATCAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGGCTCAAACTGAGA 275
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
| || | || | ||| ||| |||||| || |||| |||| ||||||| || |||
Sbjct 274 CAGGAAACCCTTTCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACC 215
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
|||| || ||||| || || ||||| |||||||||||||| || |||| || |
Sbjct 214 TCGGTACCATTCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCTCCTGATG 155
Query 94610 AGATTGCTGTGTGTAACCTGG 94630
|| |||| ||||||||| |||
Sbjct 154 AGGTTGCCGTGTGTAACTTGG 134
>seq498
Length=2934
Score = 131 bits (144), Expect = 2e-25
Identities = 212/302 (70%), Gaps = 10/302 (3%)
Strand=Plus/Minus
Query 95077 CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATC 95136
|||||||| ||| | ||||| || || ||||||||||| |||||||| | |||||
Sbjct 2621 CACGGTGTCCGCAACTCTCTGCTCGTTGCACCCATGCCCACTGCCTCCACCTCCCAGATT 2562
Query 95137 CTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTC 95196
|| ||| |||||||| ||||| || | |||||| ||| | ||| | || || ||
Sbjct 2561 CTCGGCTTCAACGAGTGCTTCGAGCCATACACCTCGAACATTTACTCGCGTCGTGTCCTG 2502
Query 95197 GCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTC--TCTGGGTG 95254
|| || || |||| || | ||| | || |||| || ||| | |||||
Sbjct 2501 GCTGGCGAGTTCCAAGTTGTTAACCCCTGGTTGCTCAAGGACTTG--GTCGATATGGGTC 2444
Query 95255 TGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGG---CTCCGTCCAGAACA 95311
||||| |||||| | ||||||| | | |||| |||| |||| |||| ||||
Sbjct 2443 TGTGGTCTGACAACATGAAGAACCGCATCAT---CGCCGACGGAGGCTCCATCCAAAACA 2387
Query 95312 TCCCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGC 95371
|||| | || || | ||||||||||| ||||| |||||||| ||||||||| | ||||
Sbjct 2386 TCCCCAACATCCCTGCCGACATCAAGGCCCTCTATAAGACCGTCTGGGAGATCTCCCAGC 2327
Query 95372 GC 95373
||
Sbjct 2326 GC 2325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494680653804800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |