Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq298 98.7 8e-16 >seq298 Length=17479 Score = 98.7 bits (108), Expect = 8e-16 Identities = 104/136 (76%), Gaps = 1/136 (1%) Strand=Plus/Minus Query 118160 GATA-CACTCCGACAGTTTTCCGTCGCGACCGGCCCTTCCTATCTCTTGATAATAACCGT 118218 |||| ||| | || ||||||||||| | ||| || | || |||||||||||||||| | Sbjct 15833 GATAGCACCCAGAGAGTTTTCCGTCTCTACCAGCGCGGCCGGTCTCTTGATAATAACCTT 15774 Query 118219 CCAGTGATTTGGGCATACTGTGATGTATCACCAACCGCACGTCGGGTTTATCGATGCCCA 118278 |||| ||| ||||| | |||||||| || ||||| |||| | ||| ||||| |||| Sbjct 15773 CCAGACTTTTCGGCATTGTCTGATGTATGACAAACCGAACGTTTGCTTTGTCGATTCCCA 15714 Query 118279 TCCCGAACGCTATCGT 118294 | || ||||| || || Sbjct 15713 TACCAAACGCAATTGT 15698 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381740788350720