Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq977 98.7 9e-16
>seq977
Length=6114
Score = 98.7 bits (108), Expect = 9e-16
Identities = 144/204 (71%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45137 ATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTG 45196
|||||| || || ||||| || || || || || | ||| ||| ||||| ||
Sbjct 4967 ATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCATCCTCCAACTG 4908
Query 45197 TTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTT 45256
|| |||||| | |||| || ||||||||||| ||||| || || || |||||||| ||
Sbjct 4907 CTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGAATCTT 4848
Query 45257 TTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGT 45316
|| | || | || ||||| || || || ||||| |||| ||| ||||| ||
Sbjct 4847 GCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTGCCCGT 4788
Query 45317 TAGAGTTTTTACAAAAATTTGCAT 45340
||||| || |||||||| |||||
Sbjct 4787 AAGAGTCTTGACAAAAATCTGCAT 4764
Score = 96.9 bits (106), Expect = 3e-15
Identities = 138/192 (72%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 45150 TCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTAT 45209
||||| ||||| || || ||||| | || | ||| || | ||| || || || |
Sbjct 5410 TCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTTCCATCCTCGAGTTGCTTACCAGCAAAG 5351
Query 45210 ATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT 45269
|||| || ||||||||||| || || || || ||||| ||||| || |||| || |
Sbjct 5350 ATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTT 5292
Query 45270 -TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTAC 45328
|| | |||||| |||||||| || |||||||||| || || || || || || || ||
Sbjct 5291 GTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAATAGTCTTTCCCGTCAGGGTCTTGAC 5232
Query 45329 AAAAATTTGCAT 45340
||||| |||||
Sbjct 5231 GAAAATCTGCAT 5220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451964327724800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |