Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq499 165 1e-35
seq3646 149 8e-31
seq498 123 3e-23
>seq499
Length=3129
Score = 165 bits (182), Expect = 1e-35
Identities = 543/836 (65%), Gaps = 15/836 (2%)
Strand=Plus/Plus
Query 116359 ACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACA 116418
||||||| ||||| || |||||||| | | | || | ||| | | || |||
Sbjct 52 ACAACCTGTGTGACCTCGTGAAGCTTCTGGAAGTCGTATGTGCCGTTGGCCATATCAACA 111
Query 116419 TACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTAC 116478
||| | || ||||| | || |||| |||||||| | |||||| | ||| ||||
Sbjct 112 TACGTTGGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTAC 171
Query 116479 TCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGAC 116538
|| | ||| || || || | || || || |||||| || | |||||| || || |
Sbjct 172 TCGACAATCTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTC 231
Query 116539 TTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTG 116598
|| ||| || ||||||||||| ||||| | || | || ||||| ||||| | || |
Sbjct 232 TTGCGGTTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCG 291
Query 116599 AGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGTTGGCTCGC---CCCTCCTC 116654
||||| | | ||| | | || | | || | ||| ||| | | || |||
Sbjct 292 AGAATGGAGTACCAAAGCTTCTGGGCCTTGA----TGGTCTTGCGACCCTTTCCATCCCT 347
Query 116655 CTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGC 116714
|||||| | ||| || ||||||||||| || || | | || | | ||| ||
Sbjct 348 CTCGTAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCA 407
Query 116715 CTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTC 116774
|| | || || | ||| | ||| | ||| || |||||| |||||||||||||| ||
Sbjct 408 CTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATC 467
Query 116775 TGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAG 116834
||||||||||| || |||| | || || || |||| || | || || ||
Sbjct 468 CGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTT 527
Query 116835 ACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGA 116894
| ||| || | || || | || |||||||||||| || || | ||| | |||| |
Sbjct 528 TCTCAAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGC 587
Query 116895 CCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAG 116951
|| ||| ||| | |||| || || || || || ||| || ||||| ||
Sbjct 588 ACCAGGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAG 647
Query 116952 CATTGGAATGATACCATCAGATTGGCCATTTGT-CCCCCGA-ATACGAGACTTGTTGGCT 117009
||| |||| |||||||| || | || || || || ||| || | || | ||||
Sbjct 648 CATGGGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATG-CACCAG-TGGCA 705
Query 117010 CTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCC 117069
| || | ||||||| || || ||||| || || ||||||||| || || |
Sbjct 706 CGGATACGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTC 765
Query 117070 GTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTC 117129
|||| || | ||||| || || || ||| |||| | ||| | ||||||| |
Sbjct 766 TTGAGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGAC 825
Query 117130 GACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAA 117185
|||| || | | ||||||||| || |||||||| ||||| | ||||| ||||
Sbjct 826 GACAGCTGAGCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAA 881
>seq3646
Length=8928
Score = 149 bits (164), Expect = 8e-31
Identities = 344/510 (67%), Gaps = 9/510 (2%)
Strand=Plus/Plus
Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590
||||||||||||||| ||||| ||||| || || |||||| || || | |||||| ||
Sbjct 1202 GTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGCCAGCCATGAGGCC 1261
Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650
|||||||| | ||||||||| | || |||||||||||||| || ||||| ||
Sbjct 1262 ACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAATACCCTCAACGGC 1321
Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGT-ATCAAACCACTTCATCG 127709
||||| |||| ||||||| ||| |||| | | |||| | | |||| | | |
Sbjct 1322 AGCGAAGGCAACGAGACGCTGGGCGAAGG-TAGAATCCTTGTCTTGGATCCACCTGACAG 1380
Query 127710 CCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCT 127769
|||| | ||||| |||| ||| || || | ||||| ||| || | ||||| | |
Sbjct 1381 CCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGAAGAGGTATGTGC 1440
Query 127770 TTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCA 127829
|| | | | || |||||||| | || ||||| || ||||| ||| |||| |
Sbjct 1441 GTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAGGGAGTATGTCTCGGCGTGAATGT 1500
Query 127830 TTTC-ATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCG 127888
| || || || || || ||||||| |||| ||||| || || ||||| |
Sbjct 1501 TCTCGATCATAATTTGGAAAC-CGTAGAAGCAGCGGGCTTCTGGGATTTGGACCTC-GCT 1558
Query 127889 GCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAG 127947
|| || | | || ||||| |||||||| || ||| | || || || || ||
Sbjct 1559 GCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGGCGAAGAAAGCGAG 1618
Query 127948 GATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGTCGTCGAGATC 128004
| | ||||| | | |||| ||||| | || | |||||||||| ||| ||
Sbjct 1619 AACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTGGAGGTC 1678
Query 128005 CTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||| |||||||| | |||||| || |||||
Sbjct 1679 CTTGGAGAGATCAATCTCCTCTGCTGTCCA 1708
>seq498
Length=2934
Score = 123 bits (136), Expect = 3e-23
Identities = 323/489 (66%), Gaps = 14/489 (3%)
Strand=Plus/Plus
Query 115558 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 115617
|||||||||||||| || |||||||| || |||||||| || | ||||| || |
Sbjct 2173 CGGAGGTAGTACATGCCGGTCTTGAGGCCAAGCTTCCAGCCAGCAAAGTGCATGGATGTG 2232
Query 115618 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 115677
| |||| | |||||| | |||| || ||| | | ||||| ||||| ||||||
Sbjct 2233 ATCTTGCCCATTGTTGGGTCCTTCATGTGGATGTTGAGAGACTGGGACTGATCAATGAAG 2292
Query 115678 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTCCCACACAGTT 115734
||| || || || ||||| | | | | | | || | || ||||| || ||
Sbjct 2293 GCTCCACGGTCAGCAGCCATCTGGACGA--TGGTGCG-CTGGGAGATCTCCCAGACGGTC 2349
Query 115735 CTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCC 115794
| |||||| ||| || || | ||||| | ||| |||||||| ||||| || |
Sbjct 2350 TTATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTTGGATGGAGCCTCCGTCG 2409
Query 115795 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCT----C 115850
|| ||| | | |||||| | | ||||| ||||| || | | |||| |
Sbjct 2410 GCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATATCGACCAAGTCCTTGAGC 2469
Query 115851 CACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTT 115910
|| ||| | || ||||| ||||| || || ||| || | | || |||||
Sbjct 2470 AACCAGGGG----TTAACAACTTGGAACTCGCCAGCCAGGACACGACGCGAGTAAATGTT 2525
Query 115911 GGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGG 115970
| ||||||||||| |||||||| ||| || | || |||| |||||||| |||||
Sbjct 2526 CGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGG 2585
Query 115971 CATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGC 116030
||||||||| | ||| || |||||||| ||| | | | || | ||||||| |
Sbjct 2586 CATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCTGGGCCTTGAGAGA 2645
Query 116031 GTCCCAGTC 116039
|||||||||
Sbjct 2646 GTCCCAGTC 2654
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613454438380800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |