Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq498 134 2e-26 >seq498 Length=2934 Score = 134 bits (148), Expect = 2e-26 Identities = 367/557 (66%), Gaps = 4/557 (1%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 || || ||||| || || | | | ||||| | || | | || ||||||||||||||| Sbjct 2134 TCGACGGTGAATTGGATAGGGGCCGAGGCAGCCATGGTACGGAGGTAGTACATGCCGGTC 2193 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || ||||| || ||| || | ||||||||| | | |||| || | ||||| Sbjct 2194 TTGAGGCCAAGCTTCCAGCCAGCAAAGTGCATGGATGTGATCTTGCCCATTGTTGGGTCC 2253 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCAT 204021 |||||| ||||| ||||||||| || || ||| ||||| || || || || ||||| Sbjct 2254 TTCATGTGGATGTTGAGAGACTGGGACTGATCAATG-AAGGCTCCACGGTCAGCAGCCAT 2312 Query 204022 ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACACGTCTCTGGTGTGTTG 204081 | || ||||| ||| || |||||||| || ||||| | | | | || ||| Sbjct 2313 CTGGACGATGGTGCGCTGGGAGATCTCCCAGACGGTCTTATAGAGGGCCTTGATGTCGGC 2372 Query 204082 AGGCACATCTTCCCACGTCCT-GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCT 204140 ||| | | | | || | ||| ||||| |||||| || | | || || | | Sbjct 2373 AGGGATGT-TGGGGATGTTTTGGATGGAGCCTCCGTCGGCGATGATGCGGTTCTTCATGT 2431 Query 204141 CCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAA 204200 || ||||| |||| || || ||| | || |||||| | | || | Sbjct 2432 TGTCAGACCACAGACCCATATCGACCAAGTCCTTGAGCAACCAGGGGTTAACAACTTGGA 2491 Query 204201 AGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGT 204260 | || || | ||| || | || | | | | ||| |||| |||| ||||| ||||| Sbjct 2492 ACTCGCCAGCCAGGACACGACGCGAGTAAATGTTCGAGGTGTATGGCTCGAAGCACTCGT 2551 Query 204261 TGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGC 204320 || ||||| |||||| | |||| ||| ||||||||||| || | |||||| ||||||| Sbjct 2552 TGAAGCCGAGAATCTGGGAGGTGGAGGCAGTGGGCATGGGTGCAACGAGCAGAGAGTTGC 2611 Query 204321 GCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTT 204380 | ||||||| | | || | | ||| |||||| |||||| || | | || Sbjct 2612 GGACACCGTGCTGCTTGATCTGGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGGG 2671 Query 204381 TCACGCCCCACATGTCG 204397 | ||||||||||||||| Sbjct 2672 TAACGCCCCACATGTCG 2688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795086816652800