Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq4873 141 2e-28
seq977 132 1e-25
seq4907 84.2 5e-11
>seq4873
Length=13461
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| ||||||||||| | ||| ||||| |||||||| |||| ||||||||| | | ||
Sbjct 6165 CGGAGTCTCAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTG 6224
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| || |||||||| ||||||||||| | |||||||||||||| ||||||
Sbjct 6225 CGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCCGGGGGAATTCCC 6284
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||| ||||| ||| || |||| ||||| | || || || || |
Sbjct 6285 TCCTTGTCCTGGATCTTGGACTTGACATTGTCGATAGTGTCGGATGACTCCACCTCAAGG 6344
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| ||||| || || ||||| || |||||
Sbjct 6345 GTGATAGTCTTGCCCGTCAGGGTCTTCACGAAGATTTG 6382
>seq977
Length=6114
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| | ||| |||||||||||||| || | |||||| || | | |||
Sbjct 4756 CGAAGACGAAGGACCAAGTGAAGAGTCGACTCCTTCTGAATGTTGTAATCGGAGAGAGTG 4697
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| || ||||| || || ||||||||||||||| ||| ||
Sbjct 4696 CGGCCGTCCTCAAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATGCCC 4637
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| |||| |||||| | | || || |||||
Sbjct 4636 TCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCCAAA 4577
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| || ||||| || || || || || ||
Sbjct 4576 GTGATGGTCTTGCCAGTGAGGGTCTTAACGAAGATCTG 4539
Score = 132 bits (146), Expect = 1e-25
Identities = 160/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | || ||||| |||||||| || | ||||||||| | ||| ||
Sbjct 4984 CGAAGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTG 4925
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| ||||| |||| |||||| || ||||| || || ||||||||||||||| ||| ||
Sbjct 4924 CGGCCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCC 4865
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| || |||||||| ||| || |||| || || | || ||| || || | |
Sbjct 4864 TCCTTGTCTTGAATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGC 4805
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| |||||||| ||||| ||||| || |||||||| ||
Sbjct 4804 GTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTG 4767
Score = 116 bits (128), Expect = 9e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| ||||| || | ||| |||||||| || | |||||| |||| || ||| | |||||
Sbjct 5203 AGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGACAGAGTACGGCCATCC 5144
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || || || || || |||||||||||||| || || || ||
Sbjct 5143 TCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCT 5084
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||| || | | || || |||||||| || |||
Sbjct 5083 TGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACCTCCAACGTAATTGTC 5024
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || |||||||| || || || |||||
Sbjct 5023 TTTCCGGTGAGAGTCTTGACGAAGATTTG 4995
Score = 109 bits (120), Expect = 1e-18
Identities = 137/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| | ||||||||| |||||||| |||| ||||||||| | | || | || ||
Sbjct 4519 AGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCC 4460
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| || ||||| ||||||||||| ||||| ||||||||||| |||||| || ||
Sbjct 4459 TCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCT 4400
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||| || | | || || || | ||||| |||
Sbjct 4399 TGAATCTTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTC 4340
Query 199598 TTACCCGT 199605
|| || ||
Sbjct 4339 TTGCCAGT 4332
Score = 105 bits (116), Expect = 2e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | || || | ||| || || |||||| |||| ||||||||| || |||
Sbjct 5440 CGAAGACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTC 5381
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
|||||||| || || ||||| || || ||||| || |||||||||||||| || ||
Sbjct 5380 CTTCCATCCTCGAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCC 5321
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| || | |||||| | | || || || |
Sbjct 5320 TCCTTATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGA 5261
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || ||||| ||||| || || || || ||||| ||
Sbjct 5260 GTAATAGTCTTTCCCGTCAGGGTCTTGACGAAAATCTG 5223
>seq4907
Length=24529
Score = 84.2 bits (92), Expect = 5e-11
Identities = 118/166 (71%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499
|||| |||| ||||||||| | | || | |||||| || |||||||| || || ||||
Sbjct 4491 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 4432
Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGATT 199559
| || ||||||||||||||| |||||| || || || ||||| ||| || |
Sbjct 4431 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 4372
Query 199560 CGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605
||| || || | | || || || | ||||| ||||| |||||
Sbjct 4371 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGT 4326
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178817678060960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |