Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq4873 149 7e-31
seq977 138 1e-27
seq4907 113 5e-20
>seq4873
Length=13461
Score = 149 bits (164), Expect = 7e-31
Identities = 148/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| |||||||| || || ||||| | || ||||||||||||||||||||
Sbjct 6194 CTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 6253
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
||||||||||||||||| | || | | |||||||||| |||||| ||||| |
Sbjct 6254 GATCAAGCGCTGCTGGTCCGGGGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATT 6313
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||| || ||||| || | ||||| || ||||||||||| || || ||
Sbjct 6314 GTCGATAGTGTCGGATGACTCCACCTCAAGGGTGATAGTCTTGCCCGTCAGGGTCTTCAC 6373
Query 46582 AAAGATTTGCAT 46593
|||||||||||
Sbjct 6374 GAAGATTTGCAT 6385
>seq977
Length=6114
Score = 138 bits (152), Expect = 1e-27
Identities = 148/193 (77%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || ||||| ||||| |||||||| |||| || |||||||| || |||||
Sbjct 4727 CTCCTTCTGAATGTTGTAATCGGAGAGAGTGCGGCCGTCCTCAAGCTGCTTACCAGCGAA 4668
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | || |||||||||| ||||| ||||| |||
Sbjct 4667 AATCAGGCGCTGCTGGTCCGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGT 4609
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | |||||| ||| || || |||| |||||||| ||||| || || || ||||
Sbjct 4608 TGTCGATGGTGTCGGACGACTCAACCTCCAAAGTGATGGTCTTGCCAGTGAGGGTCTTAA 4549
Query 46581 CAAAGATTTGCAT 46593
| ||||| |||||
Sbjct 4548 CGAAGATCTGCAT 4536
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|||| ||||| || |||||| || || |||||||| || | ||||| | || ||
Sbjct 4972 ACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCCATCCTCC 4913
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
| ||||||||| ||||| |||| |||||||||||| | || | | |||||||||
Sbjct 4912 AACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGA 4853
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| |||| | | | | || ||| |||||||| || | ||| || || |||
Sbjct 4852 ATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAATCGTCTTG 4793
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||||| || || || ||||| || |||||
Sbjct 4792 CCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 98.7 bits (108), Expect = 1e-15
Identities = 126/171 (74%), Gaps = 2/171 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||||| || ||||| |||| || || ||||||||||||||
Sbjct 4499 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAA 4440
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| || |||||||| | || | | ||||||||| ||||| |||| | |||
Sbjct 4439 GATCAGACGTTGCTGGTCCGGGGGAATTCCCTCCTTGTCTTGAATCTTGCTCTT-AACGT 4381
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCA 46571
| | | || ||| || || || || | |||||||| ||||| ||||
Sbjct 4380 TGTCGATGGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCAGTCA 4330
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
|| ||||| || || |||||| || || ||||| || || ||||| || | || ||
Sbjct 5200 ACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAGACAGAGTACGGCCATCCTCT 5141
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
||||||||||| || || || | |||||||||||| | || | || |||||| || |
Sbjct 5140 AGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTGGGATGCCCTCCTTATCTTGG 5081
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||||| | | | || || ||| || || |||| ||| || || ||
Sbjct 5080 ATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGACCTCCAACGTAATTGTCTTT 5021
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || || || || |||||||||||
Sbjct 5020 CCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
Score = 91.5 bits (100), Expect = 2e-13
Identities = 162/234 (69%), Gaps = 2/234 (1%)
Strand=Plus/Minus
Query 46361 TATTTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAG 46420
|||| ||| || | | ||| | ||||| || | || |||||||| ||||| ||||||
Sbjct 5452 TATTGGCCACCACGAAGACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAG 5393
Query 46421 TCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCG 46480
||| || || | | || ||||| ||||| || || || |||| ||||||||||||
Sbjct 5392 TCGCTCAGCGTCCTTCCATCCTCGAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCC 5333
Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGA 46539
| || | | |||||| ||| ||||| ||||| ||| | | | ||||| ||
Sbjct 5332 GGTGGGATACCCTCCTTATCCTGAATCTTGGACTTGA-CGTTGTCAATGGTGTCCGAAGA 5274
Query 46540 TTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || || | || || || || |||||||| || || || || || |||||
Sbjct 5273 CTCAACCTCGAGAGTAATAGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 5220
>seq4907
Length=24529
Score = 113 bits (124), Expect = 5e-20
Identities = 134/182 (74%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463
|||| ||||| ||||||||||| || ||||| | || |||||||||||||| || || |
Sbjct 4491 CCTTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGA 4432
Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523
||| |||||||||||| | || | | ||||||||| ||||||| ||||| |
Sbjct 4431 TCAGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGT 4372
Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583
| | || ||| || || || || | |||||||| |||||||||| || || || |
Sbjct 4371 CGATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGA 4312
Query 46584 AG 46585
||
Sbjct 4311 AG 4310
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565189789497600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |