Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3646 253 2e-62
seq977 122 9e-23
seq4873 118 1e-21
seq4907 102 8e-17
>seq3646
Length=8928
Score = 253 bits (280), Expect = 2e-62
Identities = 580/863 (67%), Gaps = 25/863 (3%)
Strand=Plus/Plus
Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650
||| || ||| ||||| || ||||| || ||||| || || ||||| || || |
Sbjct 884 CATGACACCAGTCTTTTGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTAGTCTTACCGGC 943
Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCC 132707
|| ||| ||| | ||| || || || |||||||| | |||||| ||| | ||||
Sbjct 944 CAGGGAGATGTTCTCCATGAAGTCGAATGGGTTGGCCGATTTGTAGAACTTCTCGTTGCC 1003
Query 132708 GATCAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCA 132767
|| || || |||||||||||||| |||||||| ||||||||| ||| | |
Sbjct 1004 GAG-AGAAAGA--AGCAGCCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGC 1060
Query 132768 ATTAAGTCCCAGCAGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGA 132826
|| | || ||||| ||||| || || || ||||| || || |||||| ||| |
Sbjct 1061 GTTCATGCCGAGCAG-CGCACAGGGAAGTGCCTCGGTCAGGAACTCTTGCTCAATGCTAA 1119
Query 132827 CCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGA 132886
| || ||||| | || || ||| | | ||| || || || | || ||
Sbjct 1120 CAGCCTCGGTAATGACGTCTTGGACGGCCTGCTTGCTTGGGCGGTGTTTAAGGTGAGAGA 1179
Query 132887 ACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGA 132946
| | | ||| || ||||| || | |||||||| | ||||||||| ||||| ||
Sbjct 1180 AGAGGAGGCAGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGA 1239
Query 132947 AAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCG 133006
| || | ||| | ||||||||| || || || ||||| || |||| ||||| ||| |
Sbjct 1240 AGGTAAGGCCAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAG 1299
Query 133007 AAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTT 133066
| ||||| | ||||| ||||| ||||| || || || |||| | |||| || | || |
Sbjct 1300 AGAAGAAAATACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCT 1359
Query 133067 TG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCG 133125
|| || | |||||| | | ||||| |||||||| | |||| ||| || || || |||
Sbjct 1360 TGTCTTG-GATCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCG 1418
Query 133126 ATGGCGTTCAACA---AACGGAGTTTCTCT---TCCGAGGAACGCACGTAGGTGTCGATG 133179
||||| || || | | | ||| || ||| | | ||| ||||| |||
Sbjct 1419 ATGGCATTGAAGAGGTATGTGCGTTGAGCTTGCTCCTTG------ATGTATGTGTCAATG 1472
Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239
||| || || | || | ||| | |||||| || ||||| || ||||| |||||
Sbjct 1473 AGGAGGGAGTATGTCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTAGAAGCAG 1532
Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299
|| || || | || || || ||| ||||||| || || |||||||| ||
Sbjct 1533 CGGGCTTCTGGGATTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATT 1592
Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359
||||| |||||||| || || || ||||| |||||| | |||||| | ||||||
Sbjct 1593 CCGTCCGACGCGGCGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTG 1652
Query 133360 AAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAAC 133416
| ||| | ||||||| | ||||||||| || || | |||||| | ||||| ||
Sbjct 1653 AGGCGGTTGTTCCAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAA 1712
Query 133417 GACGCCTCGGCTTTTTTGTACAT 133439
|| ||||| || || ||||||||
Sbjct 1713 GAGGCCTCCGCCTTCTTGTACAT 1735
>seq977
Length=6114
Score = 122 bits (134), Expect = 9e-23
Identities = 151/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 38268 ACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGA 38326
|| ||||| ||||||||| | || |||||| || |||| | | | | |||| | | ||
Sbjct 4332 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTTAAGAGC 4391
Query 38327 AAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAA 38386
|| | || ||||| |||||||||||| | ||||| || || || || | ||| |||||
Sbjct 4392 AAGATTCAA-GACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAA 4450
Query 38387 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCA 38446
|| || || |||| ||||||||| ||||||||||||||| ||||| | || || ||
Sbjct 4451 GCAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTCCA 4510
Query 38447 TTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| || ||| || | || ||
Sbjct 4511 CTTGGTCCTCCGTCTGCGTGGTGG 4534
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || |||||||| || || || |||| || || | ||
Sbjct 4764 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 4823
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|| | | | | |||| || || | ||||| ||||| ||||| | |||||
Sbjct 4824 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 4883
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || |||| ||| ||||| ||| |||| || | |||||| | |||||||||
Sbjct 4884 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 4943
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || ||||| | || ||||||||||| || |||
Sbjct 4944 ATTCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGT 4979
>seq4873
Length=13461
Score = 118 bits (130), Expect = 1e-21
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || || || |||||||| || |||||| | || || ||| | ||
Sbjct 6385 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCATCC 6326
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || || |||| ||||| |||||||||||| | |||||
Sbjct 6325 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 6266
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| | || | ||| ||||| ||||| || || | |||||||| |||||||||
Sbjct 6265 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 6206
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
||||| ||||| | || || || ||||| |||
Sbjct 6205 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTG 6173
>seq4907
Length=24529
Score = 102 bits (112), Expect = 8e-17
Identities = 131/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || | |||||||| ||||||||| | || |||||| || |||| | |
Sbjct 4311 TTCGTCAAGACCTTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACTATC 4370
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||||||||| | ||||| ||||| ||
Sbjct 4371 GACAATGTCAAGTCGAAGATCCAAGACAAGGAGGGAATTCCTCCGGACCAGCAGCGCCTG 4430
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | || ||||| ||||| || || | |||||||| ||||||||||||||| |||
Sbjct 4431 ATCTTTGCTGGCAAGCAGCTCGAGGATGGACGCACCCTTTCCGACTACAACATCCAGAAG 4490
Query 38433 G 38433
|
Sbjct 4491 G 4491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500129785139200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |