Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq515 125 9e-24
seq3332 120 4e-22
seq4494 105 8e-18
>seq515
Length=6877
Score = 125 bits (138), Expect = 9e-24
Identities = 226/327 (69%), Gaps = 5/327 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
|||||||| |||||||||||||| || || || ||||| | || || || ||
Sbjct 5222 TCGAAATCCTCACCACCCAAGTGGGTGTCACCAGCGGTAGAAAGAACCTCGAAAGCGCCA 5163
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
| |||||| | | || ||||| || || || ||||| || || | || | |
Sbjct 5162 CGGTCAATGGACAGGAGAGACACATCGAAGGTTCCTCCACCAAGATCGTA---GACAATG 5106
Query 7577 TTCGTATCG-TCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635
|| | || || | | | ||||||| |||||||| |||| || || || ||||| ||
Sbjct 5105 ATC-TGGCGCTCACCGTCGGTCTTATCAAGACCGTAGGCGAGGGCGGCGGCGGTTGGCTC 5047
Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695
|| | ||| || ||| ||| || || ||||| | | || || || || |||||||
Sbjct 5046 GTTGACAATGCGGAGAACGTTAAGTCCGGCAATGATACCGGCGTCCTTGGTGGCTTGTCT 4987
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| ||||| |||||||| ||||| || ||||| |||| ||||| |||||||||||
Sbjct 4986 CTGGTTGTCGTTGAAGTAGGCGGGGACGGTGACGACGGCGTGGGTGACCTTCTTACCGAG 4927
Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782
|| || || |||| || ||||| ||
Sbjct 4926 GTAAGACTCAGCGACCTCCTTCATCTT 4900
Score = 84.2 bits (92), Expect = 3e-11
Identities = 133/190 (70%), Gaps = 3/190 (2%)
Strand=Plus/Minus
Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023
||||| || ||||| || | ||||||||| || ||||| |||| || || || |
Sbjct 4663 GTGTTCTTTGGGTTTGCAGCGGCTTGGTTCTTTGCTGCGTCTCCGACCAGGCGCTCCTCC 4604
Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083
| | || || |||||||| |||||||| ||| | ||||||||||| | | |||
Sbjct 4603 T---CGGTGAATGCGACGTAAGATGGGGTAATTCTGTGACCTTGGTCGTTGACGAGAATC 4547
Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCAATACCG 8143
|| ||| | | | | ||| ||||| || || || || ||||| ||||||||||||
Sbjct 4546 TCGACGGCGCCACCCTTCATGACACCGACACAAGAGTAAGTGGTTCCCAAATCAATACCG 4487
Query 8144 ATTGCTTGAG 8153
|| || |||
Sbjct 4486 ATAACTGGAG 4477
>seq3332
Length=781
Score = 120 bits (132), Expect = 4e-22
Identities = 212/309 (69%), Gaps = 0/309 (0%)
Strand=Plus/Plus
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463
||||||| || || || || ||||| | |||||| || ||| | |||||||
Sbjct 473 CTTTCTTGTGCTTGCGCTTGAACTCGTTGACGAAGTGGTTAACGAGACGGTTGTCGAAAT 532
Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523
| |||||||||||||| || || || || || | ||||| || |||||||| | || |
Sbjct 533 CCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCCTCCTCGA 592
Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583
|| | | | || ||||| || || |||||||| || || || || || ||||| |
Sbjct 593 TGGTGAGGAGAGAGACATCGAAAGTTCCACCACCAAGATCGAAGATCAGGACGTTGCGCT 652
Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643
| | || ||||| || |||||||| ||||| || || || || || || || || |
Sbjct 653 CACCCTCGACCTTCTTGTCAAGACCGTAGGCGATGGCAGCGGCGGTAGGCTCGTTGATGA 712
Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703
|||| || ||| || || || || | ||||| || || || || || || || |
Sbjct 713 TACGGAGGACGTTGAGTCCGGCGATGAGACCGGCATCCTTGGTAGCCTGACGCTGGGAGT 772
Query 7704 CGTTAAAGT 7712
|||| ||||
Sbjct 773 CGTTGAAGT 781
>seq4494
Length=18764
Score = 105 bits (116), Expect = 8e-18
Identities = 200/291 (69%), Gaps = 14/291 (5%)
Strand=Plus/Minus
Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515
||||||||| |||||||||||||| || || || ||| | ||||| || || | ||
Sbjct 16424 ATCGAAATCCTCACCACCCAAGTGAGTGTCACCATTGGTGGACTTGACCTCGAAAACGCC 16365
Query 7516 TCCTTCA--ATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGT 7573
|||| || | | | || | ||| || || || |||||||| || | |
Sbjct 16364 --CTTCTGGATCTCGAGGACGGAGATATCGAAGGTTCCTCCACCCAGATCGTAGACAGCA 16307
Query 7574 ACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633
| | || | || || || ||| || ||||| || |||| ||| || || || ||
Sbjct 16306 ATGATCCTGTCCTCCTC------CTTCTCAAGACCATATGCGAGAGCAGCGGCGGTAGGC 16253
Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTG--CCGCATCTTTCGTCGCTT 7691
|| |||| || ||| ||| ||||||||||||||| ||| | ||||| || || ||||
Sbjct 16252 TCGTTAACAACACGGAGAACGTTCAGGCCAGCAAT--TTGACCGGCATCCTTGGTTGCTT 16195
Query 7692 GTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGA 7742
| || || || ||||| ||||| || ||||| || || || |||| | |||
Sbjct 16194 GACGCTGGGAGTCGTTGAAGTAAGCGGGGACAGTAACAACGGCGTTCTTGA 16144
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635078178579200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |