Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq499 176 6e-39
seq3646 123 3e-23
>seq499
Length=3129
Score = 176 bits (194), Expect = 6e-39
Identities = 571/878 (65%), Gaps = 19/878 (2%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| | ||||| || ||| | || || || || || ||||||||
Sbjct 974 CCGCAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAGGATATTGAGAAGACA 915
Query 111672 TTGGAGACATACGACAAGATGTCC-CGTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||||||| || ||||| | || |||| ||||| | ||||| |||||
Sbjct 914 ATCGAGACATACAACCTCATGTCTTCCAAATAC-TTCACACACGCTTCCCCAACACTCTT 856
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
||| || ||||||||| | || |||| || ||| | | | | ||||||||
Sbjct 855 CAATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTCGACATGAAGGAGGA 796
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
|| | || || || | ||| |||| |||||| ||||||||| || ||
Sbjct 795 CAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCAAAGACCGCCGG 736
Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGT-CTCGTATTAGAGGTACAA 111909
|||||||| || |||||||| | || | |||| | || | || ||||| |
Sbjct 735 AGGTATCGGATTGAACATCCATCGTATCCGTGCCA-CTGGTGCATACATCGCTGGTACCA 677
Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969
| || | || ||||||| |||| ||||| ||||| || ||| ||| || | || |
Sbjct 676 ACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCAAGATACG 617
Query 111970 TAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCACG 112026
| |||||| ||| ||| || || |||| |||| | |||||||||||||
Sbjct 616 TTGACCAAGGTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCCATGGCACG 557
Query 112027 CGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTGCC 112086
||||| || | |||||||| || ||| | ||||| || | ||||| | || ||
Sbjct 556 CGGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAGGAGGAAGTCCGTGCCC 497
Query 112087 GCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGTG 112146
| || | |||| |||||||||||| || ||||||||||||||| | |||||| ||| |
Sbjct 496 GTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTGAGAAGAACG 437
Query 112147 GCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGAGG 112206
| | ||| | ||| | || || || || || || | | || | || || |
Sbjct 436 GTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCTGACGTTTACGGCGATG 377
Query 112207 AGTTTGAAGCCCTCTACACAAAGTACGA---GGAAGAAA---GTCGGGCGACTGCGACGG 112260
||||||| || || ||| | ||||| ||| | || |||| ||| | ||
Sbjct 376 AGTTTGAGGCGCTTTACGAGAGCTACGAGAGGGATGGAAAGGGTCGCAAGACCATCAAGG 317
Query 112261 TGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCAT 112320
|||| || | ||| | | |||||| || ||||||| ||||| || | || |
Sbjct 316 -CCCAGAAGC-----TTTGGTACTCCATTCTCGAGGCTCAAACTGAGACAGGAAACCCTT 263
Query 112321 ATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCA 112380
||||| ||||| || || || |||| ||||| || || ||||| | ||| ||
Sbjct 262 TCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCTCGGTACCATTC 203
Query 112381 AGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGT 112440
|| |||||||| || ||||| || | || | | | |||||| || ||||
Sbjct 202 GCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCTCCTGATGAGGTTGCCGTGT 143
Query 112441 GTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGAT 112478
||||| | ||||| | || || || | |||||| |||
Sbjct 142 GTAACTTGGCATCCCTTGCCCTGCCAACGTATGTTGAT 105
>seq3646
Length=8928
Score = 123 bits (136), Expect = 3e-23
Identities = 168/232 (72%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149
||||| | |||||| | || |||| || || | ||||| || ||||||||| | | |
Sbjct 1432 CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCCGATTGGGCTGTCAGG 1373
Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208
||| | | |||| | | | |||| || |||| ||| | || || || |||||
Sbjct 1372 TGGATCCAAGACAAGGATTC-TACCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCCGTTGA 1314
Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268
|||||| ||||||||||| |||||| | |||| ||||| |||||||| || |||||
Sbjct 1313 GGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTTAAGAAGCGTGGCCTCAT 1254
Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320
| | || || |||||| |||||||| || || || |||||||| ||||||
Sbjct 1253 GGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAGGGTCTCCAC 1202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620689016153600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |