Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq499 176 5e-39
seq2886 89.7 6e-13
seq2891 87.8 2e-12
seq2809 87.8 2e-12
seq3228 86.0 7e-12
>seq499
Length=3129
Score = 176 bits (194), Expect = 5e-39
Identities = 592/905 (65%), Gaps = 25/905 (3%)
Strand=Plus/Plus
Query 110331 GTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATT 110390
||| || | ||| || || || | |||||| || |||| ||| | ||||||||| ||
Sbjct 168 GTACTCGACAATCTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTT 227
Query 110391 CGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGA 110450
||| |||||| |||||||| || |||||| | ||| | || || || || || |
Sbjct 228 GCTCTTGCGGTTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGC 287
Query 110451 CTTGAGAATGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTC 110507
|| |||||||| | ||| | | || | ||| || || |||| | | || ||
Sbjct 288 CTCGAGAATGGAGTACCAAAGCTTCTG-GGCCTTGATGGTCTTGCG--ACCCTTTCCATC 344
Query 110508 CTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTT 110567
| |||||| | ||| | ||||||| || | ||||| || |||| | ||||
Sbjct 345 CCTCTCGTAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCA-ACCCAG 403
Query 110568 CGC-CTTGTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACA 110626
|| || || ||| || | ||||| ||| | || || |||||| | ||||||||| |
Sbjct 404 GGCACTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGA 463
Query 110627 GGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGT 110686
| || || ||||| | || |||| | ||||||| ||| | || || | || ||||
Sbjct 464 GATCCGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGT 523
Query 110687 TGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGA 110746
| | | || | || || | || ||||| ||||||||| |||| |||| ||||
Sbjct 524 TCTTTCTCAAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGA 583
Query 110747 TGGATCCCTTACGACGAC-----CCGCCT-GGTTAACATAGCGTGCTGTGGCATTGAAGA 110800
| || | | || || ||| ||| ||| || | ||| ||| |||||||
Sbjct 584 AAGCACC---AGGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGA 640
Query 110801 CCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTTA 110859
| | |||||| |||| || |||| || | || || ||||| || | || || |
Sbjct 641 CGCGGAGCATGGGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACC-A 699
Query 110860 TTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCA 110919
||||||| || ||||| | || || ||||| || || ||| || |||
Sbjct 700 GTGGCACGGATACGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCA 759
Query 110920 CAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAA 110978
|| ||| ||||||| |||| ||||| ||||| || |||| || | | | ||
Sbjct 760 CAGGTCT-TGAGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAA 818
Query 110979 GCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAAT 111038
||| || |||| ||||| | || || || |||||||||||||| || | || || |
Sbjct 819 GCAGGACGACAGCTGAGCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGT 878
Query 111039 GAACAGACCTTGG--GACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCG 111096
||| | |||| ||||| ||||||||| |||| || | ||| | |||
Sbjct 879 GAA--GTATTTGGAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCG 936
Query 111097 TGAATACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCA 111156
||||| || | ||||| ||||| | ||| | || ||| | || | ||||||||||
Sbjct 937 TGAATGCCCACCGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTTCCATCA 996
Query 111157 ACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAATCA 111216
| ||| |||| || |||| || ||||||| ||||||||| | | |||||||
Sbjct 997 AGACGGAGAAGATACGATCTCTCCAGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCA 1056
Query 111217 CGATC 111221
|| ||
Sbjct 1057 CGGTC 1061
>seq2886
Length=2655
Score = 89.7 bits (98), Expect = 6e-13
Identities = 167/239 (70%), Gaps = 10/239 (4%)
Strand=Plus/Plus
Query 11736 GAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGC 11795
||| || ||||| || ||||| || |||||||| ||| | ||||| |||| || | |
Sbjct 1883 GAATAGCTCACGGACGCGCTTGGCACCAACACCAACGTAGATCTCGTCGAA-TTCACTAC 1941
Query 11796 AGAACACTGAAT--GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTC 11853
| ||| |||| ||| || || | ||| ||||| | || ||||| |||||||||
Sbjct 1942 CGGACA-TGAAGAAGAATGGGACGCCCGCCTCGCCAGCAACTGCACGAGCCAGGAGAGTC 2000
Query 11854 TTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACT--TC 11911
|| || ||||| || | |||| | || || | || || | |||| ||||| ||
Sbjct 2001 TTTCCAGTACCGGGGGGACCAACAAGGAGAACACCCTTAGGAAGCTTGCCACCAAGAGTC 2060
Query 11912 CA-AAGTAGCGCTCAGGCTTCTTGAGGAAGTCCACAATCTCCTCAAGTTCCTCCTTGGC 11969
| || | | |||| ||||| ||||||||||||| ||| | ||||||||||| ||
Sbjct 2061 GAGAATTTTC---CAGGGTTCTTTAGGAAGTCCACAAGCTCTTGCAGTTCCTCCTTCGC 2116
>seq2891
Length=2364
Score = 87.8 bits (96), Expect = 2e-12
Identities = 60/68 (88%), Gaps = 0/68 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 613 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 554
Query 136777 GGGAACAG 136784
| || |||
Sbjct 553 GTGACCAG 546
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 1009 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 950
Query 136777 GGGAACA 136783
| || ||
Sbjct 949 GTGACCA 943
>seq2809
Length=1925
Score = 87.8 bits (96), Expect = 2e-12
Identities = 73/88 (83%), Gaps = 1/88 (1%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 1540 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1599
Query 136777 GGGAACAGCTTTTAGAT-ATATTTTTTG 136803
| || ||| | || ||||||||||
Sbjct 1600 GTGACCAGATCACGAATCATATTTTTTG 1627
Score = 86.0 bits (94), Expect = 7e-12
Identities = 70/85 (82%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 136699 TCAAACGCACCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTC 136758
||||| | ||| || ||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1239 TCAAAAACCCCGGTCGCTTAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTC 1298
Query 136759 ACGGGTTCGAGCCCCGTTGGGAACA 136783
|| |||||| || ||| | || ||
Sbjct 1299 GCGAGTTCGACCCTCGTAGTGACCA 1323
>seq3228
Length=2204
Score = 86.0 bits (94), Expect = 7e-12
Identities = 59/67 (88%), Gaps = 0/67 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGTT 136776
||||||||||||||||||||||||||| |||||||||||||| || |||||| || |||
Sbjct 1405 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGAGTTCGACCCTCGTA 1464
Query 136777 GGGAACA 136783
| || ||
Sbjct 1465 GTGACCA 1471
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588925348064000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |