Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq3646 178 2e-39 seq499 152 1e-31 >seq3646 Length=8928 Score = 178 bits (196), Expect = 2e-39 Identities = 556/851 (65%), Gaps = 30/851 (4%) Strand=Plus/Plus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 |||||||| || || | ||||| |||||||| ||||| || ||| |||||||||||| Sbjct 900 TGGTAGTCGCCGACGCGCTTCTCGAAGAAGTTAGTCTTACCGGCCAGGGAGATGTTCTCC 959 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAG 47958 |||||| ||| ||||||| | || || | | | || ||| | ||||| Sbjct 960 ATGAAGTCGAATGGGTTGGCCGATTTGTAGAACT-TCTCGTTGCCGAGAGAAAGAAGCAG 1018 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 || |||||| |||| ||||||| ||| | | || ||||||||| | || | Sbjct 1019 CCTGTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCG- 1077 Query 48019 CACGGGCAAA-GCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 ||| || || |||| || || ||||| | ||| || || || || | | | Sbjct 1078 CACAGGGAAGTGCCTCGGTCAGGAACTCTTGCTCAATGCTAACAGCCTCGGTAATGACGT 1137 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCATGC 48131 | ||| | || | || ||| || |||| || | |||| | || Sbjct 1138 CTTGGACG---GCCT-----GCTTGCTTGGGC-GGTGTTTAAGGTGAGAGAAGAGGAGGC 1188 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 |||| ||||| |||| | || ||||| ||| |||||| |||| |||||| || | Sbjct 1189 AGGCGAAGTCAGTGTGGAGACCCTCGTCGCGGGAAATGAGCTCGTTAGAGAAGGTAAGGC 1248 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 ||| ||||| || | || || ||||||||||| | ||||| |||||||||||||| | Sbjct 1249 CAGCCATGAGGCCACGCTTCTTAAGCCAGAAAATGGATGCGAAGGAGCCAGAGAAGAAAA 1308 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 | ||||| || || ||||| || ||| | || |||| | || | ||||||| || Sbjct 1309 TACCCTCAACGGCAGCGAAGGCAACGAGACGCTGGGCGAAGGTAGAATCCTTGTCTTGGA 1368 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 |||| | ||||| || ||||||||||||||||| || || ||||| ||||| || Sbjct 1369 TCCACCTGACAGCCCAATCGGCCTTCTTCTTGATGCAAGGAATGGTCTCGATGGCATTGA 1428 Query 48372 AGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428 |||| | ||| | | || ||| | || || | |||| || | ||| Sbjct 1429 AGAGGTATGTGCGTTGAGCTTGCTCCTTGATGTATGTGTCAATGAGGAG---GGAGTATG 1485 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| | ||| | ||||| || || ||||| ||||||||| | ||| || | Sbjct 1486 TCTCGGCGTGAATGTTCTCGATCATAATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGA 1545 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 || || || || ||| | ||| || || ||||| ||||| || || || || || | Sbjct 1546 TTTGGACCTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGG 1605 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTC 48604 | ||||| || || || || | ||| | |||||| | || | |||| || ||| Sbjct 1606 CGAAGAAAGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAG-GCGGTTGTTC 1664 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | || | ||| ||| || || | || || | |||||||| || || || Sbjct 1665 CAGTCGTGGAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGAGGCCTCCGCC 1724 Query 48665 TTTTTGTACAT 48675 || |||||||| Sbjct 1725 TTCTTGTACAT 1735 >seq499 Length=3129 Score = 152 bits (168), Expect = 1e-31 Identities = 472/724 (65%), Gaps = 16/724 (2%) Strand=Plus/Plus Query 213480 GGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATG 213539 |||||||| | | |||| ||| || ||||| ||||| | || | | |||||| | Sbjct 118 GGCAGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACA 177 Query 213540 ATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCG 213599 ||||| ||||| |||||| || || ||||| || ||||||| ||||| ||| | Sbjct 178 ATCTCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGG 237 Query 213600 TTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATC 213659 ||| || ||||||||| |||||| | ||| || ||||| || | | | || || Sbjct 238 TTGCAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATG 297 Query 213660 TGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTAC 213719 | ||| || | | |||||||| | | | ||| | | |||||| Sbjct 298 GAGTACCAAAGCTTCTGGGCCTTGATGGTCTTGCGACCCTTTCCATCCCT---CTCGTAG 354 Query 213720 TGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATGCG 213779 ||||| ||| | | || || | ||| | || ||| || || || | Sbjct 355 CTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTG 414 Query 213780 GGACACATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGAC 213838 || ||||||||| ||||||| |||| | |||| || | || |||||| || ||||||| Sbjct 415 GGGCACATGAGGGTCCAGTCACCGTTCTTCTCA-ACACGCTTCATGAAGAGATCCGGGAT 473 Query 213839 CCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAG 213898 ||| || ||| ||||| ||| | || | || ||| || ||| || | || Sbjct 474 CCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAA 533 Query 213899 ATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG- 213957 ||||| || ||||||| ||||||||||| ||||| | ||||||||| || || || | Sbjct 534 GTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGG 593 Query 213958 --GCCTCTTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGG 214015 || | ||||| || ||||| || || || ||||||||| ||| || | ||| Sbjct 594 GCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGG 653 Query 214016 TACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTT 214075 || | || || || | ||||||||| || || || || | || | ||| | || | Sbjct 654 AACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCAC---GGAT 710 Query 214076 GCTCATGGA----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCA 214131 | ||||| | || || || |||||| ||| ||||||||||| ||| | | | Sbjct 711 AC-GATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGA 769 Query 214132 CAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGA 214191 || || ||| || | || ||||| || | | || | |||||||||| ||| | Sbjct 770 GTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACA 829 Query 214192 GCTG 214195 |||| Sbjct 830 GCTG 833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931452688179200