Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq499 230 4e-55
seq3646 168 1e-36
>seq499
Length=3129
Score = 230 bits (254), Expect = 4e-55
Identities = 648/977 (66%), Gaps = 21/977 (2%)
Strand=Plus/Plus
Query 221702 AGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATC 221761
||||||| | |||| |||||||||||| ||||| || | |||| | |||
Sbjct 121 AGGGCAAGGGATGCCAAGTTACACACGGCAACCTCATCAGGAGCAGAGTACTCGACAATC 180
Query 221762 TCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTG 221821
||||| || |||||| || ||||| || |||| || || || |||||| |||
Sbjct 181 TCTGTGCAAAGGTTGGAGCTGCGAATGGTACCGAGGTTCTTCTGGTTGCTCTTGCGGTTG 240
Query 221822 GCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTG 221881
||| |||||||| ||||| || || || ||||| |||||| | ||||| |
Sbjct 241 CAAGCATCCTTGTACAGCATGAAAGGGTTTCCTGTCTCAGTTTGAGCCTCGAGAATGGAG 300
Query 221882 TCCCAGAGTTCTCTGGCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTT-TCATACCC 221940
| ||| || | ||||| || | ||||| | | | || || | || || |
Sbjct 301 TACCAAAGCT-TCTGGGCCTTGATGG--TCTTG-CGACCCTTTCCATCCCTCTCGTAGCT 356
Query 221941 GGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGG 222000
|| ||| ||||||| || ||||| | || ||| || || ||| | |||
Sbjct 357 CTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCACTCGTTGGG 416
Query 222001 ACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCA 222060
||||| || |||||| ||| | | || | || ||||||||| |||||||||||
Sbjct 417 GCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCA 476
Query 222061 CAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATC 222120
|| || | || | || | || || |||||| ||||| ||| || |||| ||
Sbjct 477 GAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTC 536
Query 222121 CAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCG 222180
| |||||||| | || |||||||| ||||| | |||| ||| | ||| || || ||
Sbjct 537 TAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCG 596
Query 222181 CTTGTTGCCACCCTGATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTA 222239
|||||||||||| || || || || | ||| | |||||||| ||| || | || |
Sbjct 597 CTTGTTGCCACCTTGGTCAACGTATCT-TGCAGTGTTGTTGAAGACGCGGAGCATGGGAA 655
Query 222240 CCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC 222299
| | || || || |||||||| || ||||| ||||| ||| | || |||
Sbjct 656 CGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCAC---GGATAC 712
Query 222300 --TGGCAG-ACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAG 222356
||| | || |||||||| |||||| || ||||||||||| ||| ||||||| |
Sbjct 713 GATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTG 772
Query 222357 TGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCT 222416
|||| ||| ||||| ||| ||||||||| | || | || || || ||||||| ||
Sbjct 773 TGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCT 832
Query 222417 GAG-ATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTA 222475
||| | |||| | || ||| || || || || || |||||||| ||||| |
Sbjct 833 GAGCCTGTGGT-GTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGTATTTGGAA 891
Query 222476 GACATCAGATCGTACGTCTCTA-CGACTCTGGCGATGTTGTCCCCGTGAATCTGCATGGC 222534
||||| || | ||| ||||| | | || | | || | || |||||||| || ||
Sbjct 892 GACATGAGGTTGTATGTCTCGATTGTCT-TCTCAATATCCTCGCCGTGAATGCCCACCGC 950
Query 222535 GCATCTCATGTACATGTACTGGGGCCTCTCCACAGGACCCTTGGAGCTGGA--GAGCAGG 222592
| ||| ||||| ||| |||||||| || ||| || | | || ||| ||
Sbjct 951 AACACGCATAATCATGTGCTGCGGCCTCTCAGCA--ACCTTTCCATCAAGACGGAGAAGA 1008
Query 222593 TACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACC 222652
|||||| | ||||| |||||||| |||||||| | | || || || | | ||| ||
Sbjct 1009 TACGATCTCTCCAGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAATCACGGTCGTAAAGG 1068
Query 222653 ACGGCGGCGTCCAGCTC 222669
||||| | || |||||
Sbjct 1069 ACGGCAGAGTTGAGCTC 1085
>seq3646
Length=8928
Score = 168 bits (186), Expect = 1e-36
Identities = 549/854 (64%), Gaps = 16/854 (2%)
Strand=Plus/Minus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| |||||||||||||||| | ||| |||||| || || |||||||||||
Sbjct 1744 ATCTGGCAGATGTACAAGAAGGCGGAGGCCTCTTTCTGGACAGCAGAGGAGATTGATCTC 1685
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594
|||||||| | ||| |||| || | ||| ||||| ||| | ||| |
Sbjct 1684 TCCAAGGACCTCCACGACTGGAACAACCGCCTCAACGACGATGAGCGCTACTTCATCTCC 1625
Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | || ||||| || || || || || || || |||||||| || |||| |
Sbjct 1624 CACGTTCTCGCTTTCTTCGCCGCGTCGGACGGAATTGTCAACGAGAACCTCCTCGAGCGC 1565
Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713
|||| ||| || || || | || ||| || |||||||||||||| || |||
Sbjct 1564 TTCAGCAGCGAGGTCCAAATCCCAGAAGCCCGCTGCTTCTACGGTTTCCAAATTATGATC 1505
Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTC 25770
|| || | ||| | ||| || || || || || || ||||| | ||
Sbjct 1504 GAGAACATTCACGCCGAGACATACTCC---CTCCTCATTGACACATACATCAAGGAGCAA 1448
Query 25771 GCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGC 25829
|| | | | || || || |||||||||| ||| || ||||||||| ||||||
Sbjct 1447 GCTCAACGCACATAC-CTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGC 1389
Query 25830 GCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGC 25889
||||| | | ||||||| | | || |||| || | | |||| || || ||
Sbjct 1388 CGATTGGGCTGTCAGGTGGATCCAAGACAAGGATTCTACCTTCGCCCAGCGTCTCGTTGC 1329
Query 25890 CTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAA 25949
||| ||||| || ||||| || || ||| || || || || |||| |||||||| ||
Sbjct 1328 CTTCGCTGCCGTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTTAA 1269
Query 25950 GCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGG 26009
| || || |||| | || || ||| || ||||||||||| | | ||||||||
Sbjct 1268 GAAGCGTGGCCTCATGGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAGGG 1209
Query 26010 TCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTCTCA 26069
|||||||| || || |||||||| |||| | | ||| | ||| || ||
Sbjct 1208 TCTCCACACTGACTTCGCCTGCCTCCTCTTCTC---TCACCTTAAACAC-CGCCCAAGCA 1153
Query 26070 AG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNNNNN 26128
|| || ||||| | |||| | |||||||| || ||| | ||||| |
Sbjct 1152 AGCAGGCCGTCCAAGACGTCATTACCGAGGCTGTTAGCATTGAGCAAGAGTTCCTGACCG 1093
Query 26129 NNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTGAGT 26188
| ||||||||| || | |||| |||||||||||||
Sbjct 1092 AGGCACTTCCCTGTGCGCTGCTCGGCATGAACGCCAACTTGATGAAGCAATACATTGAGT 1033
Query 26189 ATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTAACC 26248
|| |||||| ||||| || || || | |||||| || | ||||
Sbjct 1032 TCGTCGCCGACAGGCTGCTTCTTTCTCTCGGCAACGAGAAGTTCTACAAATCGGCCAACC 973
Query 26249 CGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGAGGG 26308
| |||||||| ||||| ||||| || ||| || ||||| |||||||| || ||| | |
Sbjct 972 CATTCGACTTCATGGAGAACATCTCCCTGGCCGGTAAGACTAACTTCTTCGAGAAGCGCG 913
Query 26309 TCGGCGACTATCAA 26322
|||||||||| |||
Sbjct 912 TCGGCGACTACCAA 899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928764919347200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |