Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq499 89.7 3e-13
>seq499
Length=3129
Score = 89.7 bits (98), Expect = 3e-13
Identities = 171/252 (68%), Gaps = 0/252 (0%)
Strand=Plus/Plus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
||| ||| | || | |||||| || ||| || | ||| || ||||| | || || ||
Sbjct 429 CCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATCCGGGATCCAGAGAGCGTAGAA 488
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
|| || | || | | ||| || || ||||| |||||| | | |||| ||| |||||
Sbjct 489 CAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTTTCTCAAGTCTAGGAACTCAAA 548
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
| ||| | ||||||||| || | ||||| || ||| ||| | || |||||
Sbjct 549 GACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGCACCAGGGCGCTTGTTGCCACC 608
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGA 26145
||| || |||||||||||||| | ||||| || | ||| ||||| | ||| | ||
Sbjct 609 TTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGA 668
Query 26146 AAATCCGTTTGT 26157
|||||| ||
Sbjct 669 GTTTCCGTTGGT 680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253018782596000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |