Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq499 194 2e-44 seq3646 105 8e-18 >seq499 Length=3129 Score = 194 bits (214), Expect = 2e-44 Identities = 619/945 (66%), Gaps = 29/945 (3%) Strand=Plus/Minus Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGC-TATCTTCAACGGCTCGATGGCATCCTCAT 75204 |||||||| |||| || || |||| || | ||||||| || || ||||| | | Sbjct 1040 TACTTTGGCTTCAAGACACTGGAGA-GATCGTATCTTCTCCGTCTTGATGGAAAGGTTGC 982 Query 75205 GGAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGA 75264 || | || ||| ||||| | ||||| || || | ||||| ||||| || || ||||| Sbjct 981 TGAGAGGCCGCAGCACATGATTATGCGTGTTGCGGTGGGCATTCACGGCGAGGATATTGA 922 Query 75265 TTCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACGCAACACCA 75322 | ||||||||| || ||||| |||| || |||| ||||| | ||| Sbjct 921 GAAGACAATCGAGACATACAACCTCATGTCTTCCAAA-TAC-TTCACACACGCTTCCCCA 864 Query 75323 ACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAAC 75382 || ||||||||||| ||||||||| | ||| |||| |||||| | ||| || Sbjct 863 ACACTCTTCAATGCCGGTACACCACAGGCTCAGCTGTCGTCCTGCTTCTTGGTCGACATG 804 Query 75383 AAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAG 75442 ||||||||| || | |||||||||| || || | | ||||| ||||||||| Sbjct 803 AAGGAGGACAGTATTGAGGGTATCTATGACACACTCAAGACCTGTGCCATGATCTCAAAG 744 Query 75443 TGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGG 75502 || || ||||| || || |||||||| | | | |||| | | || Sbjct 743 ACCGCCGGAGGTATCGGATTGAACATCCATCGTATCCGTGCCACTGGTGCATACATCGCT 684 Query 75503 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 75562 || || || || | || ||||||| |||| ||||| ||||| || ||| ||| || Sbjct 683 GGTACCAACGGAAACTCGAATGGTATCGTTCCCATGCTCCGCGTCTTCAACAACACTGCA 624 Query 75563 CGCTATGTAAATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618 | || || | |||| | ||| | || || | |||| ||||| | || || Sbjct 623 AGATACGTTGACCAAG-GTGGCAACAAGCGCCCTGGTGCTTTCGCCATCTACGTCGAGCC 565 Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678 |||||| || ||| || | |||||||| || || || ||||| || | || || | Sbjct 564 ATGGCACGCGGATGTCTTTGAGTTCCTAGACTTGAGAAAGAACCACGGCAAGGAGGAAG- 506 Query 75679 TCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737 || ||| | || | || | | || ||||| || || || ||||||||||| |||| Sbjct 505 TCCGTGCCCGTGACTTGTTCTACGCTCTCTGGATCCCGGATCTCTTCATGAAGCGTGTTG 446 Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797 || || ||| | ||| | || | || || || || || || | | |||| Sbjct 445 AGAAGAACGGTGACTGGACCCTCATGTGCCCCAACGAGTGCCCTGGGTTGGCTGACGTTT 386 Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG-------AGGGTAGAGCC 75850 || || |||||||| || || ||| | || || |||| ||||| | | Sbjct 385 ACGGCGATGAGTTTGAGGCGCTTTACGAGAGCTACGA-GAGGGATGGAAAGGGTCG---C 330 Query 75851 AATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 || ||| | | || | | || | ||||| | | |||||| | | || || ||||| Sbjct 329 AA---GACCAT-CAAGGCCCAGAAGCTTTGGTACTCCATTCTCGAGGCTCAAACTGAGAC 274 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 |||| || | ||||| |||||||||||||| ||| ||||| ||||| ||||| | Sbjct 273 AGGAAACCCTTTCATGCTGTACAAGGATGCTTGCAACCGCAAGAGCAACCAGAAGAACCT 214 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 || || || ||||| || |||||||| || ||| | |||||| | | | ||||| Sbjct 213 CGGTACCATTCGCAGCTCCAACCTTTGCACAGAGATTGTCGAGTACTCTGCTCCTGATGA 154 Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 | || || || || |||||||| | ||||| |||| |||||| Sbjct 153 GGTTGCCGTGTGTAACTTGGCATCCCTTGCCCTGCCAACGTATGT 109 >seq3646 Length=8928 Score = 105 bits (116), Expect = 8e-18 Identities = 203/297 (68%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 64922 TTCATGGCGAAACATATTCAAAATTGATTGACAAATACATTAAGGATGGATCTGAAAAGA 64981 |||| | ||| ||||| || | ||||||| |||||| ||||| | || || | Sbjct 1497 TTCACGCCGAGACATACTCCCTCCTCATTGACACATACATCAAGGAGCAAGCTCAACGCA 1438 Query 64982 AGCAGTTATTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAA 65041 | | || | |||||| | || | || || || |||||||||| | ||||| Sbjct 1437 CATACCTCTTCAATGCCATCGAGACCATTCCTTGCATCAAGAAGAAGGCCGATTGGGCTG 1378 Query 65042 TGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGT 65100 | | ||| | | |||| | || |||||||| |||| || |||| || || Sbjct 1377 TCAGGTGGATCCAAGACAAGGATTCTA-CCTTCGCCCAGCGTCTCGTTGCCTTCGCTGCC 1319 Query 65101 GTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGT 65160 || |||||||| |||||||| || || ||| | |||| ||| | |||||||| || Sbjct 1318 GTTGAGGGTATTTTCTTCTCTGGCTCCTTCGCATCCATTTTCTGGCTTAAGAAGCGTGGC 1259 Query 65161 CTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 |||||| | ||||| |||||| || || || |||||||| || |||||||||||| Sbjct 1258 CTCATGGCTGGCCTTACCTTCTCTAACGAGCTCATTTCCCGCGACGAGGGTCTCCAC 1202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596518295014400