Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq977 208 1e-48 seq4873 172 7e-38 seq4591 129 8e-25 seq4494 105 9e-18 seq515 95.1 2e-14 seq2886 84.2 3e-11 >seq977 Length=6114 Score = 208 bits (230), Expect = 1e-48 Identities = 186/233 (80%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| ||||| || || ||||| ||||| || || ||||| | |||||||||| Sbjct 4531 GTGGTATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGT 4590 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| ||||| ||||| ||| |||| |||||||||| || ||||| |||||||| || | Sbjct 4591 CGTCCGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGG 4650 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || ||||| |||||||| |||||||| || || || || ||| | |||| Sbjct 4651 ACCAGCAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATT 4710 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| ||||| ||| | || || | ||||| |||||| Sbjct 4711 ACAACATTCAGAAGGAGTCGACTCTTCACTTGGTCCTTCGTCTTCGTGGTGGT 4763 Score = 205 bits (226), Expect = 1e-47 Identities = 185/233 (79%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||||||||| || || || || || ||||| || || || | ||||| |||| Sbjct 4987 GTGGTATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACAATTACGTTGGAGGTCGAGT 5046 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 |||| || || ||||||||| |||| | ||||| ||||||||||| ||||| ||||| | Sbjct 5047 CGTCGGATACCATCGATAACGTCAAGTCTAAGATCCAAGATAAGGAGGGCATCCCACCGG 5106 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || |||||||| || || ||||| || ||||| ||||| || |||||| Sbjct 5107 ACCAGCAGCGCCTAATTTTTGCGGGCAAGCAGCTAGAGGATGGCCGTACTCTGTCTGATT 5166 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| ||| |||| |||||||| | || || |||||| Sbjct 5167 ACAACATTCAGAAGGAGTCCACTTTACATCTTGTTCTCCGTCTCCGCGGTGGT 5219 Score = 167 bits (184), Expect = 3e-36 Identities = 176/232 (76%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || || || || ||||| || ||||| ||||| || ||||||||||||| Sbjct 5215 GTGGTATGCAGATTTTCGTCAAGACCCTGACGGGAAAGACTATTACTCTCGAGGTTGAGT 5274 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || ||||| || || ||| |||| |||||||||| |||||||| || || ||||| | Sbjct 5275 CTTCGGACACCATTGACAACGTCAAGTCCAAGATTCAGGATAAGGAGGGTATCCCACCGG 5334 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || || ||||||||||| || || || |||||| | || || || | Sbjct 5335 ACCAGCAGCGCCTGATCTTTGCTGGTAAGCAACTCGAGGATGGAAGGACGCTGAGCGACT 5394 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088 ||||| | || |||||| || || ||| | || || | ||||| ||||| Sbjct 5395 ACAACATCCAGAAGGAGAGCACCCTTCACTTGGTGCTCCGTCTTCGTGGTGG 5446 Score = 154 bits (170), Expect = 2e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || ||||||| || ||||| || || ||||| || || || || || |||||||| || | Sbjct 4759 GTGGTATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAAT 4818 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || ||||| || | || |||||||||||| ||||| || ||||| || | Sbjct 4819 CATCCGATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGG 4878 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 | ||||| || || ||||| || || || ||| | || ||||| || ||| | | || | Sbjct 4879 ACCAGCAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACT 4938 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 ||||| |||| |||||||| ||||| || | ||||| | ||||| |||||| Sbjct 4939 ACAACATTCAGAAGGAGTCCACTCTGCATTTGGTTCTCCGTCTTCGTGGTGGT 4991 Score = 147 bits (162), Expect = 3e-30 Identities = 155/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171886 ACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCC 171945 ||||| || || |||||||| ||||| ||||| || || || ||||| ||| | || | Sbjct 4332 ACTGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGATACCATCGACAACGTTAAGAGC 4391 Query 171946 AAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAA 172005 ||||||||||| ||||| || ||||| || || |||||||| || || || || || || Sbjct 4392 AAGATTCAAGACAAGGAGGGAATTCCCCCGGACCAGCAACGTCTGATCTTCGCCGGCAAG 4451 Query 172006 CAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTACAC 172065 || ||||| || || || |||||| | || |||||| | || |||||||| ||||| ||| Sbjct 4452 CAACTTGAGGACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCCACTCTCCAC 4511 Query 172066 CTTGTTCTAAGGCTTCGGGGTGGT 172089 | || || | || || |||||| Sbjct 4512 TTGGTCCTCCGTCTGCGTGGTGGT 4535 >seq4873 Length=13461 Score = 172 bits (190), Expect = 7e-38 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| ||||| ||||| || || || ||||||||||| ||||| ||||| || Sbjct 6385 ATGCAAATCTTCGTGAAGACCCTGACGGGCAAGACTATCACCCTTGAGGTGGAGTCATCC 6326 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| || |||| ||||||| || || ||||| || ||||| || || ||| Sbjct 6325 GACACTATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCCCCGGACCAG 6266 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || | || || || || || ||||| || ||||| || ||||| | || |||||| Sbjct 6265 CAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGACTACAAC 6206 Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091 | || |||||||| ||||| ||| | || || || || || || ||||| Sbjct 6205 ATCCAGAAGGAGTCCACTCTTCACTTGGTCCTGAGACTCCGTGGAGGTGC 6156 >seq4591 Length=9311 Score = 129 bits (142), Expect = 8e-25 Identities = 195/274 (71%), Gaps = 5/274 (2%) Strand=Plus/Minus Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 ||||| || |||||||||| || || || ||||| || |||||||| | ||||||| Sbjct 1506 ACTGTCCCAGCTTACTTCAACGACAACCAGCGTCAGGCTACCAAGGACGCCGGTGCTATT 1447 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || || ||| ||| | || ||||| || || || || ||||| ||||| || ||| Sbjct 1446 GCTGGCCTCAACGTTCTCCGTATCATCAACGAGCCTACCGCCGCTGCCATTGCCTACGGT 1387 Query 195839 CT-GGACAAGAACAAGGACG---AAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 || || | | ||| || | || || || | |||| |||||||||||||| Sbjct 1386 CTCGGTGCCGGA-AAGTCCGCCAAGGAGCGTAACGTTCTCATCTACGATCTCGGTGGTGG 1328 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 || || |||||||| || || || || | |||||| | ||| || ||||| ||||| Sbjct 1327 AACTTTCGATGTCTCCCTCCTGAACATCCAGGGTGGTGTCTTCACCGTCAAGGCCACTGC 1268 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 |||||| || || | ||||| | ||||||||| Sbjct 1267 TGGTGACACCCACTTGGGTGGACAGGATTTCGAT 1234 >seq4494 Length=18764 Score = 105 bits (116), Expect = 9e-18 Identities = 236/347 (68%), Gaps = 12/347 (3%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||||| || || | ||| | || | | || | || ||||| ||| Sbjct 16104 AAGATGAAGGAGACCGCCGAGGCCTTCCTCAACAAGCCAATCAAGAACGCCGTTGTTACT 16163 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || |||||||||| || || || || || || || ||||| || | | ||||| Sbjct 16164 GTCCCCGCTTACTTCAACGACTCCCAGCGTCAAGCAACCAAGGATGCCGGTCAAATTGCT 16223 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| ||| | || | || || || || || ||||| | || |||||||| Sbjct 16224 GGCCTGAACGTTCTCCGTGTTGTTAACGAGCCTACCGCCGCTGCTCTCGCATATGGTCTT 16283 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 || ||| | ||||| | ||| | | || ||| ||||| ||||| || || || Sbjct 16284 GAGAAGGAGGAGGAC-AGGATCA----TTGCTG-TCTACGATCTGGGTGGAGGAACCTTC 16337 Query 195902 GATGTCTCACTTCTCAATAT--TGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTG 195959 ||| |||| | ||| | || |||| || | ||||| || ||| | || ||||| Sbjct 16338 GATATCTCCGTCCTCGAGATCCAGAAG--GGCGTTTTCGAGGTCAAGTCCACCAATGGTG 16395 Query 195960 ATACTCATCTAGGTGGTGAAGATTTCGAT-GCACGTCTTCTCCGTCA 196005 | ||||| | |||||||| ||||||||| ||| |||| |||| || Sbjct 16396 ACACTCACTTGGGTGGTGAGGATTTCGATATCAC-TCTTGTCCGCCA 16441 >seq515 Length=6877 Score = 95.1 bits (104), Expect = 2e-14 Identities = 219/326 (67%), Gaps = 3/326 (1%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 |||||||||||| || || |||| | | ||||| | || | | || || || || Sbjct 4900 AAGATGAAGGAGGTCGCTGAGTCTTACCTCGGTAAGAAGGTCACCCACGCCGTCGTCACC 4959 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| || || |||| || || |||||||| | | ||||| Sbjct 4960 GTCCCCGCCTACTTCAACGACAACCAGAGACAAGCCACCAAGGACGCCGGTATCATTGCC 5019 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| ||| | ||| |||| || ||||| || || || | || || ||||| Sbjct 5020 GGACTTAACGTTCTCCGCATTGTCAACGAGCCAACCGCCGCCGCCCTCGCCTACGGTCTT 5079 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 || |||| | | | | || | || |||| ||| ||||| ||||| || || || Sbjct 5080 GATAAGACCGACGGTG-AGCGCCAGAT-CATTG-TCTACGATCTTGGTGGAGGAACCTTC 5136 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || || || ||||| |||| ||||| || |||| |||||||| Sbjct 5137 GATGTGTCTCTCCTGTCCATTGACCGTGGCGCTTTCGAGGTTCTTTCTACCGCTGGTGAC 5196 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 || || | |||||||| |||||||| Sbjct 5197 ACCCACTTGGGTGGTGAGGATTTCGA 5222 Score = 95.1 bits (104), Expect = 2e-14 Identities = 165/240 (69%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 196638 AGGATAACCATCTACTTGGAACTTTCGATTTGACGGGGATTCCAGCTGCACCCAGAGGTG 196697 |||| ||| | | ||||| | ||||| | || || || ||| | |||||| | |||| Sbjct 5920 AGGACAACAACCAGCTTGGCAAGTTCGAGCTTACTGGCATCCCACCCGCACCCCGTGGTG 5979 Query 196698 TTCCACAGATTAATGTTTGCTTCGATATAGACGCAAATGGAATTCTAAACGTCACAGCTG 196757 | ||||| || | || | ||||| | || || || ||||| || || || || |||| Sbjct 5980 TGCCACAAATCGAGGTCTCTTTCGAGCTTGATGCCAACGGAATCCTCAAGGTTACCGCTG 6039 Query 196758 AGGACAAGGCTTCTGGCAAATCTGAAAAGATTGTGATTACCAATGACAAGGGGCGGCTTT 196817 ||||||| | || || || || || || ||||| |||||||| || ||| Sbjct 6040 GTGACAAGGGCACCGGAAAGTCCGAGTCCATCACCATCACCAACGACAAGGGACGTCTTA 6099 Query 196818 CTAAGGAGGAAATTGAACGTATGGTTCAAGATGCGGAAAAGTACAGGGAAGAAGACGAGG 196877 | ||||||| || || ||||||||||| || || || ||||| || || ||| ||| Sbjct 6100 CCCAGGAGGAGATCGACCGTATGGTTCAGGAGGCTGAGCAGTACGCCGATGAGGACAAGG 6159 >seq2886 Length=2655 Score = 84.2 bits (92), Expect = 3e-11 Identities = 164/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 198477 GCTAAGGATGAGCTCGAGGAGATTGTTGATTTTCTTAAAAACCCCGAAAAGTACTATGGA 198536 || ||||| || || | ||| |||| || || || || ||||| | ||| | || Sbjct 2116 GCGAAGGAGGAACTGCAAGAGCTTGTGGACTTCCTAAAGAACCCTGGAAAATTCTCGACT 2057 Query 198537 AGTGGTGCCC-GAATCCCACGTGGTGCTCTTCTCGCCGGTGCCCCGGGTACTGGTAAAAC 198595 ||||| | | ||| | | |||| ||| || | ||| |||| |||||||| || || Sbjct 2056 CTTGGTGGCAAGCTTCCTAAG-GGTGTTCTCCTTGTTGGTCCCCCCGGTACTGGAAAGAC 1998 Query 198596 CCTTCTAGCTCGTGCTATCGCGGGTGAATCGAGTGTCCCCTT--TCTTCAGTGCTCCGCG 198653 || || |||||||| | || || || || | ||||| || |||||| || | | Sbjct 1997 TCTCCTGGCTCGTGCAGTTGCTGGCGAGGCGGGCGTCCCATTCTTCTTCA-TGTCCGGTA 1939 Query 198654 GCGAGTTTCATCGAGATGTTCGTTGGTGTTGGTGCTAAGCGCGTCCGGGAACTCTT 198709 | || || | |||||| | ||||||||||||||| ||||||||||| || || || Sbjct 1938 GTGAATTCGA-CGAGATCTACGTTGGTGTTGGTGCCAAGCGCGTCCGTGAGCTATT 1884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657805823833600