Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq977 93.3 8e-14
>seq977
Length=6114
Score = 93.3 bits (102), Expect = 8e-14
Identities = 162/236 (69%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184
|||| |||||||| | | || || |||| ||||| || | ||| || ||| ||
Sbjct 4999 ATTTGCATACCACCACGAAGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTG 4940
Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244
||||| || || || | ||| || || || || || || ||||| | | ||| ||
Sbjct 4939 TAGTCCGACAAGGTGCGGCCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGG 4880
Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304
|| ||||| || || || || ||||| || ||| | || | ||| |||||||||||
Sbjct 4879 TCCGGAGGAATACCCTCCTTGTCTTGAATCTTGCTCTTAACATTGTCGATAGTATCGGAT 4820
Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| || || || || || || || || || || || || || ||||| || |||||
Sbjct 4819 GATTCCACCTCGAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899577029721600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |