Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq6168 122 1e-21
seq3646 114 2e-19
seq499 113 6e-19
>seq6168
Length=1385
Score = 122 bits (134), Expect = 1e-21
Identities = 102/125 (82%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227
||||||||| | ||||| ||| |||||||||||||||||||||| |||||||| | ||
Sbjct 258 CTCTTTGAGATCATCCTGGCCTCCAACTACCTCGACATCAAGCCCCTGCTCGACGTCGGC 317
Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287
|||||| | ||||| || ||||||||||| ||| || |||||||| | ||||| |||
Sbjct 318 TGCAAGACGGTGGCGAATATGATCAAGGGGAAGAGCCCGGAGGAGATTAGGAAGACGTTT 377
Query 1592288 AACAT 1592292
|| ||
Sbjct 378 AATAT 382
>seq3646
Length=8928
Score = 114 bits (126), Expect = 2e-19
Identities = 161/226 (71%), Gaps = 0/226 (0%)
Strand=Plus/Plus
Query 868699 GTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCAT 868758
||| ||||| |||||| |||||| ||||| ||||| || | || ||||| ||||||
Sbjct 902 GTAGTCGCCGACGCGCTTCTCGAAGAAGTTAGTCTTACCGGCCAGGGAGATGTTCTCCAT 961
Query 868759 CCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCG 868818
| ||| ||||||| || |||||| ||| ||| ||||| || ||||| |
Sbjct 962 GAAGTCGAATGGGTTGGCCGATTTGTAGAACTTCTCGTTGCCGAGAGAAAGAAGCAGCCT 1021
Query 868819 GTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCAC 868878
||||||||| ||||| ||||| || ||| | | |||||||||||||| |||||
Sbjct 1022 GTCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACA 1081
Query 868879 CGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924
|| || | |||| ||| ||||||| ||| || || ||||||
Sbjct 1082 GGGAAGTGCCTCGGTCAGGAACTCTTGCTCAATGCTAACAGCCTCG 1127
Score = 109 bits (120), Expect = 7e-18
Identities = 175/249 (70%), Gaps = 3/249 (1%)
Strand=Plus/Plus
Query 869635 GTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGGAC 869694
||| ||||||||||| || ||||| ||||| ||| | | |||| | ||||||
Sbjct 1493 GTGAATGTTCTCGATCATAATTTGGAAACCGTAGAAGCAGCGGGCTTCTGGGATTTGGAC 1552
Query 869695 CTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAAAA 869754
||| | |||| || || ||||||||| || || ||||| |||||||| ||
Sbjct 1553 CTCGCTGCTGAAGCGCTCGAGGAGGTTCTCGTTGACAATTCCGTCCGACGCGGCGAAGAA 1612
Query 869755 AGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA-GCG--ACACCCAGTGGAC 869811
||| || ||||| ||| |||| |||||| |||||| ||| ||| ||||| |
Sbjct 1613 AGCGAGAACGTGGGAGATGAAGTAGCGCTCATCGTCGTTGAGGCGGTTGTTCCAGTCGTG 1672
Query 869812 GGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871
| ||| | ||| || | |||||| || ||||||| |||||||| ||||| |||||
Sbjct 1673 GAGGTCCTTGGAGAGATCAATCTCCTCTGCTGTCCAGAAAGAGGCCTCCGCCTTCTTGTA 1732
Query 869872 CATCTCCCA 869880
||||| |||
Sbjct 1733 CATCTGCCA 1741
>seq499
Length=3129
Score = 113 bits (124), Expect = 6e-19
Identities = 179/257 (70%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125
||||| ||||| | || |||| ||| ||||||||||||||||| |||| || || ||
Sbjct 610 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAG 669
Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185
| |||||||| || || | ||| || || | ||| || | || | || |||
Sbjct 670 TTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 729
Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245
|| || ||||| | ||| ||||| | || || ||||| ||||| ||||| |||||
Sbjct 730 ATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCA 789
Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305
|| ||| |||||||||| || | ||||| ||||| || | || | || |||
Sbjct 790 ATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCG 849
Query 1630306 GCGTTGAAGAGCGTGGG 1630322
|| |||||||| || ||
Sbjct 850 GCATTGAAGAGTGTTGG 866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106574594980960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |