Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq499 114 1e-20
seq977 107 2e-18
seq498 96.9 3e-15
>seq499
Length=3129
Score = 114 bits (126), Expect = 1e-20
Identities = 460/715 (64%), Gaps = 17/715 (2%)
Strand=Plus/Plus
Query 139302 CTCGTACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACA 139361
|||||| | ||||| || | || || || ||||| |||||| | | | ||
Sbjct 348 CTCGTAGCTCTCGTAAAGCGCCTCAAACTCATCGCCGTAAACGTCAGCCAACCCAGGGCA 407
Query 139362 CTTGTCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATC 139421
|| || || |||||||| | ||| | |||||| || || ||| ||||||| |||||
Sbjct 408 CTCGTTGGGGCACATGAGGGTCCAGTCACCGTTCTTCTCAACACGCTTCATGAAGAGATC 467
Query 139422 CGGAATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACG 139481
||| ||||| | |||| | | ||| || || || || ||| || |||
Sbjct 468 CGGGATCCAGAGAGCGTAGAACAAGTCACGGGCACGGACTTCCTCCTTGCCGTGGTTCTT 527
Query 139482 TTTCATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGC 139541
| ||| || ||||| ||||| || || ||||||||||| || | |||||||| | ||
Sbjct 528 TCTCAAGTCTAGGAACTCAAAGACATCCGCGTGCCATGGCTCGACGTAGATGGCGAAAGC 587
Query 139542 GCCTTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAA 139598
|| || ||| |||||||| || |||| || | ||| || ||||| ||||| |
Sbjct 588 ACCAGGGCGCTTGTTGCCACCTTGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAG 647
Query 139599 CATCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGC 139655
||| || | | ||| ||| |||||||||| | | |||| | || || ||
Sbjct 648 CATGGGAACGATACCATTCGAGTTTCCGTTGGTACCAGCGATGTATGCACCAGTG---GC 704
Query 139656 TCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCA-AT 139714
|||| ||| | || | ||||| || ||| | || || || | | || |
Sbjct 705 ACGGATACGATGGATGTTCAATCCGATACCTCCGGCGGTCTTTGAGATCATGGCACAGGT 764
Query 139715 CGCGTAATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATG 139774
| | | ||| || || ||||| || ||||| |||| ||| ||||| ||||| |
Sbjct 765 CTTG-AGTGTGTCATAGATACCCTCAATACTGTCCTCCTTCATGTCGACCAAGAAGCAGG 823
Query 139775 ACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-C 139833
|||| || || | || || ||||| || || || || ||||| |||||
Sbjct 824 ACGACAGCTGAGCCTGTGGTGTACCGGCATTGAAGAGTGTTGGGGAAGCGTGTGTGAAGT 883
Query 139834 ATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATA 139893
||||| ||||| | | ||| || ||||| | || |||||||| ||||| ||
Sbjct 884 ATTTG-GAAGACATGAGGTTGTATGTCTCGATTGTCTTCTCAATATCCTCGCCGTGAATG 942
Query 139894 CCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttttt 139953
|| || | || ||||| | ||| || || || || || ||| || || |
Sbjct 943 CCCACCGCAACACGCATAATCATGTGCTGCGGCCTCTCAGCAACCTTTCCATCAAGACGG 1002
Query 139954 ttCAGATAACCGTTCTCT--AGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
||||| || ||||| || |||||| |||||||||| |||||||||||
Sbjct 1003 AGAAGATA--CGATCTCTCCAGTGTCTTGAAGCCAAAGTATTGGTAGTTGAAATC 1055
>seq977
Length=6114
Score = 107 bits (118), Expect = 2e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| ||| | || || || || || || || ||||||||||| || ||| | ||
Sbjct 4764 ATGCAGATTTTTGTCAAGACTCTTACGGGCAAGACGATTACGCTCGAGGTGGAATCATCC 4823
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|| || | || | || || ||||| |||||||| || || || ||||| || ||
Sbjct 4824 GATACTATCGACAATGTTAAGAGCAAGATTCAAGACAAGGAGGGTATTCCTCCGGACCAG 4883
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||| || || || || ||| |||||||| | | | |||| || || |||
Sbjct 4884 CAGCGCCTGATTTTCGCAGGCAAGCAGTTGGAGGATGGCCGCACCTTGTCGGACTACAAC 4943
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| || || || || |||||
Sbjct 4944 ATTCAGAAGGAGTCCACTCTGCATTTGGT 4972
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| |||| || || || || || || || || | || || || | ||
Sbjct 4536 ATGCAGATCTTCGTTAAGACCCTCACTGGCAAGACCATCACTTTGGAGGTTGAGTCGTCC 4595
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 4596 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCGGACCAG 4655
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || |||| || || || || ||||| ||||| | | | || ||||| |||
Sbjct 4656 CAGCGCCTGATTTTCGCTGGTAAGCAGCTTGAGGACGGCCGCACTCTCTCCGATTACAAC 4715
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912
||||| ||||| ||||| || ||||||||
Sbjct 4716 ATTCAGAAGGAGTCGACTCTTCACTTGGT 4744
>seq498
Length=2934
Score = 96.9 bits (106), Expect = 3e-15
Identities = 239/361 (66%), Gaps = 4/361 (1%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGC--GGTATTGTTGCAATATTTT 138415
|||||||| |||||||| ||||| | |||||| || || | | || ||||
Sbjct 2335 ATCTCCCAGACGGTCTT--ATAGAGGGCCTTGATGTCGGCAGGGATGTTGGGGATGTTTT 2392
Query 138416 GAATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACT 138475
| ||| || | | || |||||||| || |||||| || ||||| || |
Sbjct 2393 GGATGGAGCCTCCGTCGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGACCCATAT 2452
Query 138476 TGATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535
|| |||||| || | || | ||| | || || || || || |||| || ||||
Sbjct 2453 CGACCAAGTCCTTGAGCAACCAGGGGTTAACAACTTGGAACTCGCCAGCCAGGACACGAC 2512
Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595
| ||||||||| |||| | ||||| || | |||||| || |||||||| | |
Sbjct 2513 GCGAGTAAATGTTCGAGGTGTATGGCTCGAAGCACTCGTTGAAGCCGAGAATCTGGGAGG 2572
Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655
||| || || |||||| || || | ||||| || || | |||||| |||||||
Sbjct 2573 TGGAGGCAGTGGGCATGGGTGCAACGAGCAGAGAGTTGCGGACACCGTGCTGCTTGATCT 2632
Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715
| ||||||| || ||||||||||| ||| |||| | | |||||| ||||| |
Sbjct 2633 GGGCCTTGAGAGAGTCCCAGTCCCACAGGTCGGTAGGGGTAACGCCCCACATGTCGTATT 2692
Query 138716 G 138716
|
Sbjct 2693 G 2693
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449858908806400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |