Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq3646 125 1e-22
seq6168 116 6e-20
seq499 98.7 2e-14
>seq3646
Length=8928
Score = 125 bits (138), Expect = 1e-22
Identities = 167/232 (72%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967
|| ||||| |||||| |||||| ||||| ||||| || | || ||||| ||||||
Sbjct 903 TAGTCGCCGACGCGCTTCTCGAAGAAGTTAGTCTTACCGGCCAGGGAGATGTTCTCCATG 962
Query 793968 CACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGG 794027
| ||| |||||||||| |||| ||||||| ||||| || |||||| | |
Sbjct 963 AAGTCGAATGGGTTGGCCGATTTGTAGAACTTCTCGTTGCCGAGAGAAAGAAGCAGCCTG 1022
Query 794028 TCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACG 794087
||||||||||| |||||||| || ||| | | |||||||||||||| ||||| |
Sbjct 1023 TCGGCGACGAACTCAATGTATTGCTTCATCAAGTTGGCGTTCATGCCGAGCAGCGCACAG 1082
Query 794088 GGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGA 794139
|| || | |||| | | ||||||| ||| || || |||||| | ||||
Sbjct 1083 GGAAGTGCCTCGGTCAGGAACTCTTGCTCAATGCTAACAGCCTCGGTAATGA 1134
>seq6168
Length=1385
Score = 116 bits (128), Expect = 6e-20
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 2035612 AGGTCGACCAACCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGC 2035671
|||| |||||| | ||||||||| | ||||| ||| |||||||||||||||||||||
Sbjct 241 AGGTAGACCAAGAGATGCTCTTTGAGATCATCCTGGCCTCCAACTACCTCGACATCAAGC 300
Query 2035672 CCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGG 2035731
|||| ||||| | || |||||||| ||||| || | |||||||| ||| || ||||
Sbjct 301 CCCTGCTCGACGTCGGCTGCAAGACGGTGGCGAATATGATCAAGGGGAAGAGCCCGGAGG 360
Query 2035732 ACATCCGCAAGACCTTTAACAT 2035753
| || | ||||| ||||| ||
Sbjct 361 AGATTAGGAAGACGTTTAATAT 382
>seq499
Length=3129
Score = 98.7 bits (108), Expect = 2e-14
Identities = 176/257 (68%), Gaps = 0/257 (0%)
Strand=Plus/Plus
Query 2073541 TGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGAC 2073600
||||| || || | || |||| ||| ||||||||||||||||| || | || || ||
Sbjct 610 TGGTCAACGTATCTTGCAGTGTTGTTGAAGACGCGGAGCATGGGAACGATACCATTCGAG 669
Query 2073601 TCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCCG 2073660
| |||||||| || || | ||| || || | ||| || | || | || |||
Sbjct 670 TTTCCGTTGGTACCAGCGATGTATGCACCAGTGGCACGGATACGATGGATGTTCAATCCG 729
Query 2073661 ATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTCG 2073720
|| || ||||| | ||| ||||| | || || | || || || || ||||| |||||
Sbjct 730 ATACCTCCGGCGGTCTTTGAGATCATGGCACAGGTCTTGAGTGTGTCATAGATACCCTCA 789
Query 2073721 ATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCCG 2073780
|| ||| |||||||||| | || ||||| ||||| || | | | || |||
Sbjct 790 ATACTGTCCTCCTTCATGTCGACCAAGAAGCAGGACGACAGCTGAGCCTGTGGTGTACCG 849
Query 2073781 GCATTGAAGAGCGTGGG 2073797
||||||||||| || ||
Sbjct 850 GCATTGAAGAGTGTTGG 866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915514543020320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |