Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq977 114 1e-20
>seq977
Length=6114
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || |||||||| || ||||| || || |||||||| || |||| | ||||||
Sbjct 4979 ACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCGACAAGGTGCGGCC 4920
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| || | || ||||| || | |||| | ||||| ||||| ||||||||||| ||
Sbjct 4919 ATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTT 4860
Query 29691 GTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749
|||||| ||| || | || ||| | || | ||| || || ||| || || || || |
Sbjct 4859 GTCTTG-AATCTTGCTCTTAACATTGTCGATAGTATCGGATGATTCCACCTCGAGCGTAA 4801
Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
| || ||||| || | || || ||||| ||||||||
Sbjct 4800 TCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385186899370080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |