Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudogymnoascus_20sp._20VKM_20F- 3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq4494 86.0 5e-11 >seq4494 Length=18764 Score = 86.0 bits (94), Expect = 5e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282335 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 282394 || ||||||||||| || | |||||| || || || || |||| || | | ||| || Sbjct 16288 TTCTCAAGACCATATGCGAGAGCAGCGGCGGTAGGCTCGTTAACAACACGGAGAACGTTC 16229 Query 282395 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 282454 || ||||||||| || ||||| || || ||||| | || || ||||| || || || Sbjct 16228 AGGCCAGCAATTTGACCGGCATCCTTGGTTGCTTGACGCTGGGAGTCGTTGAAGTAAGCG 16169 Query 282455 GGAACAGTAATAACGGC 282471 || ||||||| |||||| Sbjct 16168 GGGACAGTAACAACGGC 16152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740292621074880