Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudogymnoascus_20sp._20VKM_20F-
3775_20[genbank_20GCA_5F000750715.1_202014-09-09] 6,880 sequences; 28,506,885 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq977 107 4e-18
seq4907 89.7 1e-12
>seq977
Length=6114
Score = 107 bits (118), Expect = 4e-18
Identities = 161/229 (70%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| ||||| | || | ||| || || ||||| || || |||||||
Sbjct 5220 TACCACCGCGGAGACGGAGAACAAGATGTAAAGTGGACTCCTTCTGAATGTTGTAATCAG 5161
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| ||| | | || || ||||| || || || ||||| ||||| | || || || || |
Sbjct 5160 ACAGAGTACGGCCATCCTCTAGCTGCTTGCCCGCAAAAATTAGGCGCTGCTGGTCCGGTG 5101
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761
| || || ||||||||||| ||||| | || || || || || ||||| | || |
Sbjct 5100 GGATGCCCTCCTTATCTTGGATCTTAGACTTGACGTTATCGATGGTATCCGACGACTCGA 5041
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| ||||| || || ||||| || || | ||||| || || || |||||
Sbjct 5040 CCTCCAACGTAATTGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 4992
Score = 105 bits (116), Expect = 1e-17
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | | ||| ||||| || |||||||| || || ||||| || || || || |
Sbjct 4992 TACCACCACGAAGACGGAGAACCAAATGCAGAGTGGACTCCTTCTGAATGTTGTAGTCCG 4933
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| | | | || || || | || || || || || || || | || || || ||||
Sbjct 4932 ACAAGGTGCGGCCATCCTCCAACTGCTTGCCTGCGAAAATCAGGCGCTGCTGGTCCGGAG 4873
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTA-CATTTTCAATCGTATCATTAGGTTCT 82760
| || || ||||| ||||||||||| ||| ||| |||| || || ||||| | |||
Sbjct 4872 GAATACCCTCCTTGTCTTGAATCTT-GCTCTTAACATTGTCGATAGTATCGGATGATTCC 4814
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| || | || ||||||||||| || | ||||| ||||| ||||||||
Sbjct 4813 ACCTCGAGCGTAATCGTCTTGCCCGTAAGAGTCTTGACAAAAATCTGCAT 4764
Score = 102 bits (112), Expect = 2e-16
Identities = 149/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641
|||| || | || ||| || || ||||| ||||| || || ||||| || || || || |
Sbjct 4536 TACCACCACGCAGACGGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGG 4477
Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701
| || | | ||||| || ||||| || || || ||||| || | ||| || || || |
Sbjct 4476 AGAGGGTGCGGCCGTCCTCAAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCCGGGG 4417
Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCT-TTTACATTTTCAATCGTATCATTAGGTTCT 82760
| ||||| ||||| ||||||||| ||||| || || || || || ||||| | ||
Sbjct 4416 GAATTCCCTCCTTGTCTTGAATC-TTGCTCTTAACGTTGTCGATGGTATCGGAGGACTCG 4358
Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCA 82788
|| || | || || |||||||| ||||
Sbjct 4357 ACCTCAAGGGTGATGGTCTTGCCAGTCA 4330
Score = 96.9 bits (106), Expect = 7e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || ||||| || || || ||||| || || || || || | || ||
Sbjct 5435 ACGGAGCACCAAGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGCGTCCTTCC 5376
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|| || ||||| || ||||||||||| || | || || || || || || || |||||
Sbjct 5375 ATCCTCGAGTTGCTTACCAGCAAAGATCAGGCGCTGCTGGTCCGGTGGGATACCCTCCTT 5316
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
||| |||||||| | || || || ||||| || || || || || || | ||| ||
Sbjct 5315 ATCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCCGAAGACTCAACCTCGAGAGTAAT 5256
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||| || |||| ||||| || || ||||||||
Sbjct 5255 AGTCTTTCCCGTCAGGGTCTTGACGAAAATCTGCAT 5220
>seq4907
Length=24529
Score = 89.7 bits (98), Expect = 1e-12
Identities = 127/179 (71%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 82623 TTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATT 82682
||||| || || || || || || | | || || || || || || |||||||||||
Sbjct 4489 TTCTGGATGTTGTAGTCGGAAAGGGTGCGTCCATCCTCGAGCTGCTTGCCAGCAAAGATC 4430
Query 82683 AGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCA 82742
|| | || || || ||||| ||||| ||||| ||||| ||||| | || ||||| ||
Sbjct 4429 AGGCGCTGCTGGTCCGGAGGAATTCCCTCCTTGTCTTGGATCTTCGACTTGACATTGTCG 4370
Query 82743 ATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAA 82801
|| ||||| | || || || | || || |||||||| ||||| ||||| || ||
Sbjct 4369 ATAGTATCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAAGGTCTTGACGAA 4311
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981740651932320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |